Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTCATCCAGGTCGTGGCGCTGCTGCTCCTGACCATCTTCGTGCTGTTCCGCCTGCTCGGCCGCAACTACGACGCAGCAGTGCTCTGCGCCGGCTTCCTC GGCCATGGCCTGGGCGCGACGCCGAACGCGGTGGCCAACATGGGTGCGGTCTGCGAACACTACCGGGTGTTCTCGCGCAAGGCCTTCATCATCGTGCCGC TGTGCGGAGCGGTACTGATCGACCTGGTCGCGATTCCGGCGATCACCTGGTTCATCAACGCCTTCAGCTGAGCCGATAGCGGCGCTCCGCCAGCGGAGCG CCAGCTTTCCGACGAGCACCAAGACACAGAGACATCAAAGCGCCATTATTTCGTCGAAATACTTCATTTTTTCCTACAGAATAGGGAAACCATTCCTAAG GAATCCGGTCAGTGCCACTGAATTACCCGTTCTTCGGTTGGCTGGCACGAAACTCGCCTCAGCCCTACTGTCGCCGTCTTTCGCGCCAGAGGTCCCGCGC
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DNA Sequence for Gene |
>NQ70_RS05150
ATGGCTCCTCCCAAACAATCCAATACCATCGATTTCGATGCCGCCAAGCAGAAGCGCGGCGCGCAGCCTGGCGCCGGCGGAGTTCCCCGCGCCGGCAACC TGATGGAGTTGCGCCAGCAACTGACCCAGCAGTTGCAGAGCAGCCTCGAGGCAGAACGCATCCTCGGCCTGTTCTTCGAGGAGGTCCGCCAGTTGATTCC GCTGGACGCCCTCGGCTACCGCCATCCGGGCTCCGACCTGCGCCTGGAATTCGGCAGCAGCGCCAAGCACTCGGTGAGCTACCGCCTGAGCCATGACAGC GACTACCTCGGCGAACTGATCTTCCGCCGCCGCCAGCGCCTCGGCGAAGAGGAACAGCGGCAACTGGAAAGCCTGCTCGGCACCCTGCTGTTCCCGCTGC GCAACGCCCTGCTCTACCGCGCGGCGATCCAGACCGCCCTGCGCGACGCCCTGACCGGCACCGGCAACCGCATCGCCATGGACCAGGCGCTCGGCCGCGA ACTGGAACTGGCCCGGCGCAACCTGCAACCGCTCTCGGTGCTGATGCTGGATATCGACCACTTCAAGCGGGTCAACGACCACTACGGCCACGCCGTCGGC GACGAGGCCCTCAAGGCGGTGGCGGAAACCATCAAGGATCACCTGCGCAATGTCGACATGGTGTTCCGCTTCGGCGGCGAGGAATTCCTCGTCCTGCTGT CCAGCACGCCGCTGCAGGCTGCCTGCATGGTCGGCGAACGTCTGCGCCAGGCGGTGGAGGAACTGGACTACCGGCATGCCGGCGAAACGCTGAAGCTATC GATCAGCCTCGGTTGTGCCGACCTGCGGCCCGGCGAAGGCAGCGACGACCTGCTGCGGCGGGTTGACGAGGCGCTCTACGAGGCCAAGCGCGACGGCCGC AATCGCCTGCGCTGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCCGCCGGCCGGCGGAAGCGCGACGCGTTCGGAGGCCGGACTTCCTATGGCTGCGCCGGCTCGTCAGGAGCGCCATAGGCCTGGCACCGGCGTCGCCC CCTCCCCGGCCAGCCCGACGACGCTCCACAGCGTGCCAAGCACGATCACCGCGATCCTGTGCATGTCACCACCTCCCTGTTCTGCGGGCGACCATTAGAC ACCGATTCCCAGGCATGAAAAAGGCCCCCGAAGGGGCCTTTCCACGGAGCCTTCCGCTCAGCGGCGGAAGCCCGGACGCATGCCATCGCCGGCCGGCTTC GGCCGCCGCTTGACCTGCGGCTTGCGCGCCGCCGGCTTGTCGCCCGGCGCGCCGGCCGGACGTTCGTCGCGCGGCTTGCTCGGGCGCGGCTTGCGGTTGC TCTCGCGGGGCCGCTCGGCGACTGGCGTTCCCTGCTCGCGCCCCTTGCGCTCGGCGCCCGGCTGCGGACCGCGCGAGGAACGCGAGGCCGGCGTGCGGCG
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Amino Acid Sequence |
>DeoR family transcriptional regulator
MAPPKQSNTIDFDAAKQKRGAQPGAGGVPRAGNLMELRQQLTQQLQSSLEAERILGLFFEEVRQLIPLDALGYRHPGSDLRLEFGSSAKHSVSYRLSHDS DYLGELIFRRRQRLGEEEQRQLESLLGTLLFPLRNALLYRAAIQTALRDALTGTGNRIAMDQALGRELELARRNLQPLSVLMLDIDHFKRVNDHYGHAVG DEALKAVAETIKDHLRNVDMVFRFGGEEFLVLLSSTPLQAACMVGERLRQAVEELDYRHAGETLKLSISLGCADLRPGEGSDDLLRRVDEALYEAKRDGR NRLRCA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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