Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_36, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACTGCCGGTGGGCTTCACCGACGACCCGTTCGAGGCGCTGGAGCTGCAGGACGCCCTGCAATGCAAGTACACCGGCGGCACCGTGCTGCATCTCTACAT GGCCGAGCGGATTTCCTCCGCCGAAGCCTGCAAGACCCTGGTGCGCACCGCCCTCGGTCGCTTCCGCCTGCCGTACCTGACCGTCACCCCCACCTTCTCG ATCTGCCCGCGGCACGGCTACCTGGCCGGCGAGCACGAGTTCTGCCCGAAGTGCGACGAGGAGCTGCTGCAACGCTCCACGCCCAAGAGCTGTTGCGGCG GCTGCGGCGGTTGAGTCGCCTGTCGTTCCTTTCATCCACCAGCAAGGAGTACCACCGATGAACCCCAACCAGTTGCCCGAAGGCCAGCGCCAGCGCTGCG AAGTCTGGACCCGCGTGATGGGCTACCACCGTCCCGTGGCAGCGTTCAATGCCGGCAAGCAGTCCGAGCATCGCGAACGCCGCCATTTCCGCGAGACGCG
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DNA Sequence for Gene |
>NQ70_RS29500
ATGAGCGCCACGCTCAGGGTCGGGGGCCTGGTGCCCCTGACCACCCTCGACTACCCCGGCCTGCTCGCCTGCGTGCTGTTCTGCCAGGGCTGCGCCTGGC GCTGCCGCTACTGCCACAACCCGGAACTGATCGCGCCGCGCGGCGCGGAGGAAATCCCCTGGCCACGCCTGCTCGACTTCCTCCGCCGACGCCAGGGCCT GTTGCAGGCGGTGGTCTTCAGCGGCGGCGAGGCGACCCTGCAGGCGGCCCTCGGCGACGCCATGCGCACGGTCCGCGAACTGGGTTTCCGCGTCGGCCTG CACAGCGCCGGCATCAACCCCCGCGCCTTCGCCCGGGTGCTGGCGCAGAGCGACTGGGTGGGCTTCGACGTCAAGGCGCCGGCCGAGGACGTCGCCGCCA TTACCGGCGTGGACGGCAGCGGCGCGGCCAACTGGCGCAGCCTGGAATGCCTGCTGGACAGCGGCGTGGCCTACGAATGCCGGACCACGGTGCACTGGCG CTTGTTCGATAGCGAACGCCTCTGGCGCCTGGCGACGCGCCTGCGCGAGATGGGCGTGGAGCGCTTCGCCGTACAACTGGCGCGCCCGGCCCGCCAGCTC GATCCGCAGCTTCTCGCGAAGCCCGCGCCGCAGGGCGCTGCGCAGCTATGGCGAGAACTGGAAGAGCTGTTTCCCGCCTTCGAACTGCGCGACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTCCGGTTCAGCGGCGCCGCTCGGGCCTGCCAGCTCGCTCGGACAGGGCGGGCAGTCCCGACCAGGCCTGTCCTTCACAAGACTCATACGATCGTACG AGAGCACCTCCTCGATTCCTAGTTGCGTCCAATTGTCGCGGACGGCGCCGCTCGCCACCCTTGCTCCAGATTCAGCGACCCCGGACCCGCGCCATGAAAC TCACGCTCACCCCTCCCCTGACCCCCAGCCACTGGATGCGCTCGACCGACCTGGCCGACGCCACCAGCGCCCCCCTCGTCGGCACCCACTCGGCGGACGT GGCGATAGTCGGCGGCGGTTTCGTCGGGCTCTGGACCGCCATCACCCTCAAACAACTGGAGCCGGACGCACGGGTCCTGCTGCTGGAGCAGGACGTCTGC GGCGGCGGCGCTTCCGGCAGGAACGGTGGTTTCGTGATGTCCTGGTGGCCGAAGATCGGTACCTTGCTGGGCTTCTGCAGCGAGGCGCAGGCGCGCTTCC
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Amino Acid Sequence |
>radical SAM protein
MSATLRVGGLVPLTTLDYPGLLACVLFCQGCAWRCRYCHNPELIAPRGAEEIPWPRLLDFLRRRQGLLQAVVFSGGEATLQAALGDAMRTVRELGFRVGL HSAGINPRAFARVLAQSDWVGFDVKAPAEDVAAITGVDGSGAANWRSLECLLDSGVAYECRTTVHWRLFDSERLWRLATRLREMGVERFAVQLARPARQL DPQLLAKPAPQGAAQLWRELEELFPAFELRDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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