Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_32, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGTCATCGGCTGCATCATCGCCACCCGCCTGATCAACCGCATCGGCCGGCGCTGCATGCTGCTGCACAGCTTCCTCTGGTCCGGCCTGGCGCTGCTCGGG CTGGGCGTCTTCCACGCCGGCTCGGAGGCGACCATCCTCGGCCTGTTCGGTGCCTACGCGCTGTTCATCGGCGGCGCCCAGGTGCTGCAACTGGTCTACC CGAACGAACTGTTCCCCACCGAGATCCGCGCCTTCGCGGTCGGCGTCGGCACCTCGTTATCGCGCGTCGGCGCCGCGGTGGGCACCTACCTGGTGCCGCT TTCCCTGGAAACCCTGGGTACCGCCCAGACCATGTACGCCGCCGCGCTGGTGACCCTGCTCGGGCTGCTCGTGACCTGGGCCCTGGCGCCGGAAACCCGT TCGCTGAACCTGCAGCAGGCGGCTTCGCTCACCTGAACCACCCGCCGCGGCAGCGTCCGCCGGGTGCGCCGCGGCCCAGCATCCCACAGGAGGAACCCCC
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DNA Sequence for Gene |
>NQ70_RS28910
GTGAAATTCGAAGGTATCTATACCCCCGCCATCACCCCGCTGAGCGCCGACGGCAGCATCGACACCCAGGCCTTCGCCGAGGTCCTGGAGTTTCTCGTCG AGTCGAAGGTGCACGGCATCGTGATCGGCGGCTCCACCGGCGAGTACTACGCGCACACCGCCGAGGAACGCCTGGCCCTCGCCGCCCACGCCAGCGAAGT CATCGCCGGGCGCCTGCCGCTGGTGGTGGGAACCGGCGCGATCCGCACCGAGGACTCGCTGGCCTACGCCGAAGCCGCCCGCGCCATCGGCGCCGACGCC ATCCTGGTCGGCTCGCCGCCCTACGCGCTGCCGACCTCGCGGGAGATCGCCGAGCACGTGCTGGCGGTGGATCGCGCCGCCGGCCTGCCGATCATGCTCT ACAACTATCCGGCGCGGATGGGCGTGGAGATGGACGAGGCGTTCTTCGCCGCCGTCGCCGGCTGCCGCAACATCGTCGCGATCAAGGAAAGCTCCGGCTC CACCGCGCAATTGCACCGCCTGGCCTGCCGCCACCCGCGGATCGCCTTGTCCTGCGGCTGGGACGACCAGGCCCTGGAGTTCTTCGCCTGGGGCGCGCGC AGTTGGGTCTGCGCCGGCTCCAACTTCATCCCTGGCGAACACCTCGCCCTGTACCAGGCCTGCGTGGTCGAGAACGACTTCGCCAAGGGCCGGCGCATCA TGGCGGCGATGATGCCGCTGATGGACTTTCTCGAAAGCGGTCACTTCGTCCAGTCGATCAAGCACGGCTGCGAACTGGCCGGCCTGCGCGCCGGCGGCGT ACGTGCGCCGCTAAAGGCGCTGGACGAGGCCGGCAAGGCGGCACTGGCGGAGATCGTCGCCAGGCTCAAGGGCGAGGTCGCGCGGATCGTCGAGGGTGGC CGCCATGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCTGCTGAGCCGGGAGGAATACGCGGCCATCGCCGCGACGCTGGACCTTCCCCAGCGCGCCTTCATCGACGGAGGGTTCCGCGATGCCTGCGGCGGCCGC ACCTTCGCCTCGACCAACCCGGCCACCGGCGAGCTGCTGGCGCAGGTCGCCGCCTGCGACGCGGAGGACGTCGGGCACGCCGTGGCCAGCGCGCGGCGGG CGTTCGAGGACGGCCGCTGGCGCTCGCGCACGCCCGCCGAGCGCAAGGCGGCGCTGCTGCGCCTGGCCGAGCTGCTGGAAGAGCACCTGCTGGAACTGGC GGTGATGGAGAGCCTCGACAGCGGCAAGCCGATCCGCGAATGCCAGCACACCGACCTGCCGGAAACCATCAATACCCTGCGCTGGCATGCCGAACTGATC GACAAGATCTACGACAGCACCGCCCCGGTCGGTTCGGCGGCGCTGGCCATGGTGGTACGCGAGCCGATCGGCGTGGTCGGCCTGGTGCTGCCGTGGAACT
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Amino Acid Sequence |
>dihydrodipicolinate synthetase
MKFEGIYTPAITPLSADGSIDTQAFAEVLEFLVESKVHGIVIGGSTGEYYAHTAEERLALAAHASEVIAGRLPLVVGTGAIRTEDSLAYAEAARAIGADA ILVGSPPYALPTSREIAEHVLAVDRAAGLPIMLYNYPARMGVEMDEAFFAAVAGCRNIVAIKESSGSTAQLHRLACRHPRIALSCGWDDQALEFFAWGAR SWVCAGSNFIPGEHLALYQACVVENDFAKGRRIMAAMMPLMDFLESGHFVQSIKHGCELAGLRAGGVRAPLKALDEAGKAALAEIVARLKGEVARIVEGG RHD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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