Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGAGGTCGCCGGGGGCCAGCTCGGCGAGCTTGCGGCAGAGTTCGATGGCGCGCGGGTTGGCCATGTCGCAGAAGGGATTGGAATAGGCCAGCAGGCGG GTCTGCTCGGCCACGGTGCGAGCCATTTCCTCGCGCCCCAGGCCGATGTTGGTGCACCACATGCCGCCCACCGCGTCGAGGTAGCGGTTGCCGGCGGTGT CGTAGATATAGGCGCCGTCGCCGGCGGCGATGTTCAGCGAGCCGTTGACGCGGTGGTCGTCGAACACGTGGTAGCCGTGCATGTAGTGGGCCTGGTCGGC ACGGACCAGGTCGGCGTCGCCGAGGGGGGACGTGGCGTGCAGTCTTGCGTTCATCGGGCTGTCGCTCTTCTCGGATGGATGCTCCGAGGGTGCAAGAGCA CCGCGCGGCGGGCCATACCCCATTTTGGGGTAAGCGCTGGGTGCGGCCGACGCGGCTTGCTATCCTGCGGCGACAACGACAAGAACGAGCCGTACCGTCC
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DNA Sequence for Gene |
>NQ70_RS03890
ATGCAGGCCATCGCCCCGAACGCGCTCGACCGCTGGCACGAACACCTGGCGCTGGCGATCCGGCGCCTGCGCCAACCCGACTTCCTCGCCGCGCTGGTCG ACGCCATCCACCAACTGGTGCCGATCGAGTCGAGCATGATCAGCCTGGAACGCAAGGGCCACGCGCCCACCCTGCTCTACGAGCGCGGCATCGCCGAGCG CTTCCGCGAGGCGATCATCCGCCGCTACTTCTCCCGCGGCTACCTGCTCGACCCTTTCTGCCTGGCGGTGGAGGAAGGCCTTCCGGAAGGCTTCTACACC CTCGGCGAGATCGCCCCCGACGACTTCTTCCAGAGCGCCTACTACCAGACCTACTACCTCGGCGCCGGAGCGGTGGAGGACGTCTACTACATCCTCGACC TCGGCCCTACCGAGAAGCTCTCGATCTGTCTCTACAACGGCCTTTCGGCGAGCCGCTACAGCGACGCCCAGGTCGCCGTCCTCGCCGGCCTGGCGCCGCC GGTGCTGGAGCTGGCCCGGCAGTTCTGCGCCGGGCGCGCCGACCTCTCGCCGAACCCGCAGGCCGACCTCGCCCCGCGCCTTCAGGAAGTGCTGCGCGGC TTCGGTCGCGGCGTGCTCACCGACCGCGAACGCGAGGCTTGCCACCTGCTGCTCAGCGGCCACTCGGCGAAATCCAGCGCGCGGCTGATGGACATCTCCC CGGAGACCGTGCGCATGCACCGGAAGAATCTCTACACCAAGCTGGAAGTCGGCTCGCAGTCGGAACTGTTCGCGCTGTTCATCGAGTGCCTGAGCCAGGG GCAGCGCGTCGGCCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACTCAGGGCGAGACGCCGCCGAGCAACTGTTCGGCCAGCGCCGAGCCCTCGCGCAGGCGACGGTCGTTGCCGATGCGGCGGGTCAGGCCGATGCGGTCG AAGTGCTCGAGGATCTGGATGCTGCGCTTGCGACCGATACCCAGGCGGTCGCGGAATTCCGCCGGGCGGATCAGCCCGGCGGGGTCGCGCACCTGCACGG CGATCTCGGCCAATTGACGCAGGGTGGCTTCCGGGTAGAACAGGTCGCGCACCACCTGCTGCAACTGGCCCAGGCGTGCCAGCTTGCGCAGCAGGTTGCG CATGACGGCTTCATCCTGGCGCAGCTCGCGGGCCAGGTCGCGGACCCAGGGCGGGTCGTAGCGGCCGGCTTCGAGCAGCGGCCAGAGGCGCGCGCGCAGT TGCTCCTCGCTATCGCTCAGGCGCACTTCGTGGCCGGGCAGGTGCAGCCAGGGCCCGCTGCTGTGCACATCGCCGCCGGCCAGGGCGGCGTCGAGCAGGG
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Amino Acid Sequence |
>transcriptional regulator
MQAIAPNALDRWHEHLALAIRRLRQPDFLAALVDAIHQLVPIESSMISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLAVEEGLPEGFYT LGEIAPDDFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNGLSASRYSDAQVAVLAGLAPPVLELARQFCAGRADLSPNPQADLAPRLQEVLRG FGRGVLTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIECLSQGQRVGP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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