Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCATCGCCGGCGCCCGCGGCGGCCTGGTGATCGGCACCGACCATGCTGCCGAGGCGGTCATGGGGTTCTTCACCAAGTTCGGCGACGGCGCCTGCGAC CTGGCTCCGCTCAGCGGCCTGGCCAAGCATCAGGTACGCGCCCTCGCCCGCGCCCTCGGCGCTCCGGAGAACCTGGTGGAGAAGATCCCCACCGCCGACC TCGAGGACCTGCGCCCCGGCCATCCGGACGAGGCTTCCCACGGCGTCACCTATGCCGAGATCGACGCCTTCCTGCACGGCCAGTCGCTGCGCGAGGAAGC TGCGCGGGTGATCGTCGACACCTACCACAAGACCCAGCACAAGCGCGAACTGCCGAAGGCGCCCTGAGCCTCCCGGTCCGTGCGGCAGGCCCGTCGTCGA CGGGCCTTTGTCGCGGGCGGGAATGTGCCTGTCGCAACCAGGTCTTCAAGTCCGCGCGGCGGCGCGCTAGAAGGAAGCTGAATCCCTGCGAAGGCCAGCC
|
|
DNA Sequence for Gene |
>NQ70_RS03305
ATGCGCACCCGTCTCCCCGCCCTGCTCCTCGGTGTCCTGCTGTCCGGCCAGGCCTGCGGACACACATCCCCGCTGCTCGCGCCGGTACGGCAGATCCACG CCTTCGGCGACAGCTATTCGGACAACGGCGAAAGCCAGCGACTGACCCGCGAGATGCTCGCCAAGGGCATCGCCGGCGCCCAGGCATTGCCCGGCGAAGT CTACTGGCAGGGCCGCTGGAGCAACGGCCCGACCGCCGTCGAGGTGCTCGCCCGCCAGCTTGGTGCGCAACTGGCCGACCATGCGGTGGGCGGCGCCAAG AGCGGAGCGGACAACTACTACGGCTGGATGAGCGCCTACCGCCATACCGGCCTCGCCGGCCAGGTCGACGCCTACCTCGCCACGCTGGACGGCAAGCCGG TCGATGGCCAGGCGCTGCACTTCATCTTCGTCTCCGCCAACGATTTCTTCGAGCACGAGGATTTCGCCGGCGAGCAGCCCCTGGAACAACTGGCCGGCAG CAGCGTGGCGAACATCCGCGCCGCGGTGCAGCGTCTCGGAGAGGCCGGCGCACGACGCTTCCTGGTGGTCAGTTCGACCGACCTGAGCGTGGTCCCGGCG GTGGTCGTCGGCAACCGGGTCGAGCGTGCGCAGCGCTACCTGCAAGCGGTCAACGCCAGCCTGCCGATCCAGCTCGCCGCCCTGCGCAAGACCCGCGACC TGGAGCTGAGCTGGTTCGACCATCTCACCTTCAGCCGCCACTTGCGGCGCAACCCGGCACGCTACGGCCTGGTGGAGCTGGACGCGCCCTGCCAGCCGAC CCAGCCCAGCGTCCGCCCGGCCTGCGCCAACCCGGACCAGTACTACTTCTGGGACGAGTGGCATCCGACCCGGCGCGTGCACCAACTGGCCGGCGAAGCG ATGGCGGCGCGCTACGCGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCCGGCGCGCGCCCATGAAAAAGCCCGGCAGCGGCCGGGCTTTTTCATGCAGCGGATCGCTCGCGCATCACTTCAGGGTCAGGGTGCCCTTCATCAGCG CGGAGTGGCCCGGGAAGGTGCAGAAGAACATGTACTGCTCGCCTTCCTTCAGCTTGGAGACGTCGAAGGTCACCGAGTCCTTCTCGCCCGAGCCGATCAG CTTGGTGTGGGCGATGACACGGCTGTCGTCGGGCTTCAGGTAATCCTTGTCCAGGCCGGAAGCCATGCCGTCGGTGACCACGCCCTGCATGTCGGCGGCG GTGCTCAGTACCCAGTTGTGGCCCATGACGTTCTTCGGCAGGTTGCCGGGGTGGGACAGGTTGACGGTGAACTGCTTGCAGCTCTTGTCGACGGTGATGG CATTGGTGTTGAACTGCATCTGGTCGTTACCCTGGATGTCCACCGAGCACTCGGCAGCCAGCAGCGGCGCACTGAGCAGGGACAGCAGGGATACCGCAGC
|
|
Amino Acid Sequence |
>GDSL family lipase
MRTRLPALLLGVLLSGQACGHTSPLLAPVRQIHAFGDSYSDNGESQRLTREMLAKGIAGAQALPGEVYWQGRWSNGPTAVEVLARQLGAQLADHAVGGAK SGADNYYGWMSAYRHTGLAGQVDAYLATLDGKPVDGQALHFIFVSANDFFEHEDFAGEQPLEQLAGSSVANIRAAVQRLGEAGARRFLVVSSTDLSVVPA VVVGNRVERAQRYLQAVNASLPIQLAALRKTRDLELSWFDHLTFSRHLRRNPARYGLVELDAPCQPTQPSVRPACANPDQYYFWDEWHPTRRVHQLAGEA MAARYAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|