Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTCCAACTGTTCGACGAGGACATGGAACTGGAGTCACTGCTGCGCCTTGCCGCCGCGGCGATCTCCCGCCTGCAGACCCATCAGTTGTCGAGCCTGGCGC AGACCAGCACCCTGCCGGATGGCACCCAACTGGCGACCTGGCAGATGGAGGTGCCCATGCGCCATCAGCACTCGGTGGTACCGTTGCAGGTGAAGTTCCA GGAAGAACAGCGCAAGACCGGCGAAGAGGCCCGCGAAAGCCTCTGGCGCGTCGAACTGGCCTTCGACCTGGAGCCGCTGGGACCGCTGCACGCCCAGGCG ACCCTGCTACGCGGCAGCCTGTCCAGCCAGCTTTGGGCCGAGCGAGACGCGACCGCGCGGCTGGTCGAGCATGAACTCGGCCACCTGCGCCAACGCCTGC GCGACGCCGGCCTGACCGTTGGCGAGATCACCTGCCAACGCGGCCGCCCGCCCCAGGGCCCGCGAGCGACCATCGAACAACGCTGGGTAGACGAAACCGC
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DNA Sequence for Gene |
>NQ70_RS22260
ATGAACAGAAAGCAGTCACCCGCCCCGCGCCAGGCCATCGCCCTGAGCTACGACGGCCAGGCCGCGCCGACCCTTTCCGCCAAGGGCGACGCCGAACTGG CCGAGGCGATCCTGGCCATCGCCCGCGACTACGAGGTACCGATCTACGAGAACGCCGAGCTGGTCCGCCTGCTCGCCCGCCTGGAACTCGGCGACGCCAT TCCGGAAGCGCTGTATCGCACCATCGCTGAGATCATCGCCTTCGCCTGGCACCTGAAAGGCAAGTGTCCCGAGGGATTCGCGCCGGACGCCGCGGATGGC GACGAGATGCTGCTGCTCGGCGGTCCCGGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAACCCGCCACGCGTCGAAACCGAAGCGCCGGAACCGGAATCCGCGAGAGCGGTCCCAGCACAGTCCACCTGCCACTTCCCAGGCCGCCCATGTCCTC GCCAAGCCCCCTCCTCCTCGCCGCCCTGCTGCTTATCGCCAGCCATGTCCAGGCCGCCCCGGCCATCCTCGGCGACGAGGAAAAGGATGCAATCATCGAT CGGCACCGGCTGACTCCGGAGTTCCGCATCAATCGGCAAGCCAAGGTACGCCATCACGAAGGAACCATCGACCGCGTGGTCCTGCTTCAGGATAGGGACC GCTTCACCTACCGAAGCTACCTTCGCGACGACCAGAAGGAGCCTGCCACCTTCTGGATCCTGGAGTTCGACGCACGCAGCGGGAAACGGCTGAGCGAACG CCAGACCGATGAGGACGACTATTGGCGTAGACGCGACGCCGACTCGCAACGGGCCGACAGCGGCGAAAGGAACCGATAGATAGCACAGCCGAAACCTTCG
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Amino Acid Sequence |
>FlhB
MNRKQSPAPRQAIALSYDGQAAPTLSAKGDAELAEAILAIARDYEVPIYENAELVRLLARLELGDAIPEALYRTIAEIIAFAWHLKGKCPEGFAPDAADG DEMLLLGGPGD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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