Strain | Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTGCGCCGCGAGGAACCCGGCACGCGCCTCACCGTGTTGCAGTCGGCGGTGGCCGCGCGCGCGGAAACGCTCAGCGAAGAGCGTGTGATCAAGGAAGGC CAGCAGGTGCTGATCCTGCCGCAAGGCCTGCAGGCCAGCGAAGCGGCCCCGGCCCTGGCCGGCGCCTGGGCACAAGGCATGCTGGTGGTGGAGAACGCCC GGCTGGCCGACCTGGTGGCGGAACTGGGGCGCTATTCGCCGGCGCTGCTGCAGGTCGACCCGAGCATCGCCGACCTGCGCGTCACCGGCAGTTTCCCGCT GAAGGACACCCGCCTCGCCCTTCAGGCTTTGGAGCCGAGCCTGCCGGTGCGCAGCGTAAGGCACAACGCCTGGTGGTTCGAAGTGGTGCCACGCTGAACC GAACGGGCCGGCGAAAAATTTTTCCCGCCGGCCCTATCACTTTTTCCGATTCGTCCGGCAAGGAGGCATTGAGACTCGTTTCCATCCAGGAGCCCCGCAC
|
|
DNA Sequence for Gene |
>NQ70_RS16300
ATGCCCCGCCCGACGTTCCGTCCCGGCCTGCTCGCCCTAGCCATCGCCCTCGCCGTTCCCGCACCGTTCCTCCACGCCGCTCCGGCCGAACAGGCCAGCG TGCGCGACTACCGCATCGCCGCCGGGCCGCTGGCAGGCACCCTGAACCGCATCGCGGCCCAGGCCGGCCTGGTCCTCACCCTGGACCCGGCGCTCGCCGA AGGACGCAGCGCCCACGCCGTGCAAGGTCGCTTCGACGCGCCCGGCGCATTGCGCGAAGCGCTCAAGGGCAGCGGCCTGGAACTGGTGGAAAATGCCGGC GGCACCTACAGCCTGCGCAAGGTGCCGGAAGACACCCTGTCGCTGCAGGCGATGACGGTCAGCGGCGCCGAGGAAGACCCACTGGGGCCGACCAGCGGCT ACGTGGCCAAGCGCAGCATGACCGGCACCAAGACCGATACGCCGATCCTCGAGACCCCGCGCTCGATCTCGGTGGCGACCCGCCAGCAGATGACCGACCG CGCCGTGCACAACCTCGACGACGCGGTGCGCTACATGCCCGGCGTCGTCGCCAGCAGCTTCGGCAGCGACACCCGCTCCGACTGGTTGAAGGTGCGCGGC TTCAAGCCGACCCAGTTCCTCGACGGCCTGCCGATGGCGGTCGGCGTCTACAACAACCCGAAGCTGGAAACCTGGAACCTGGAGCGTGTCGCCCTGTTGC GCGGCCCGGCCTCCTCGGTCTACGGCCAGACCCCGCCCGGCGGCATGCTCGACATGGTCAGCCTGCGTCCGCAGAACGTCGCCAGTCACGAGGTGAAGGC CGAGGTCGGCAACTACAACCACAAGCAGGTCAGCTTCGACAGCACCGGCCCGCTCGACGACGAGGGACGCTTTCTCTACCGCGTCTCCGGCGTGGTGCGC GACAGCAACACCCAGGTCGACCATATCGACGACAAGCGCTACAACATCGCCCCGAGCCTGACCTGGAACATCGACGACGACACCAGGCTGACCTTCCTCG GCCAGTTCAACCGCGACGATACCGGCATCACCAGCCAGTTCCTGCCGCTGCGCGGAACCAAGTACGACGCGCCGTTCGGCAAGGTTTCCCATCACAAGAA CCTCGGCGATCCGGACTGGGAATACTACGACCGCACCTACTACTGGCTGGGCTACGCCTTCGAGCGGCGGATCAACGATGTCTGGCAGTTCCGCCAGAAC CTGCGCTACCTGCGCAACGACCTGTCGTTCCAGGGGATTACAGCGGGCACAGCTCATGCCGACGGCACACTGGAACGCAGCACCACCTCGGTGGATGAAG ACGTCAGTCAGTTCGTAGTAGATAACAACTTCCAGGCCGACTTCGAAACAGGCGCCCTGCGCCACACCCTGCTGCTAGGCCTGGATCACAACCGCACCGA CAACCAATACACATCGATCTTTGGCAGCGCGCCGCCGAGCAACGTCATCAACCCGATCTACGGCCAGCCGATCGTCAAACCGGATCGTTCGACGGCCTTC TACGACTACAAGCAGAAGACCTACCAGACCGGCCTCTACGTCCAGGACCAGATCGCCCTCGACAACTGGCGCCTGACCCTCGGCGGTCGCGAGGACTGGG TGCACACAGGCGCCACCTTCTACAACAAGGGCGACGCCACCAATACCAGCCGCGACAAGAAGTTCAGCGGCAACGCGGCGCTCAGCTACATCTTCGACAA TGGCGTGGCGCCCTATATCTCCTATGCGGAGTCGTTCCAGCCCACCACTGGCGCCGATATGAACAGCACCAGTTCGCTGAAGCCGACCGAAGGCAAGCAA TGGGAAATCGGCGTGAAGTACCAGCCGGTAGGCTCCGACTCGCTGTTCACCGCCGCGGTCTATGACCTGCGCCAGGAGAACGTCAGCGTGTCGCAGAACA TAGGGGGCACGCCGGTCACTTCGCAGACGGGCGAAGTGAAGGTCTCCGGGATAGAACTGGAAGCCACCAGCAACGTCACCGACAACCTGAAGATGATCGG CGCCTATAGCTACGCCGACACCGAAGTGAAAAAAGGCCAGTACGCAGGCAACCGCCTGCAACAGGCGCCGCGCAACCAGGCCTCGCTATGGGCCGACTAC ACCTGGCACGAGGGTACGCTGAACGGTTTCAGCGTGGGTGCCGGCGCCCGCTACGTAGGCTCGACCTACGGCGACCAGGCCAACACCTACGACGGCTACG CCGGCTCGTACACCCTGTACGACGCCGCCGTGCGCTACGACCTGGGCCAATTGAACGGCAGCCTGAAAGGCGTCAGCGTGGCGGTCAATGCCAACAATCT GTTCAACAAGGACTACCTGGCGTCCTGCGACGGCTACTACTGCTACTACGGCGACCAGCGCAGCGTGGTGGGCAGCGTCAGCTACAAGTGGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGACGCGTCACAGGTGCGTAACGGCGGATAACCGCTTCGCGGTTATTCGCCCTACCGCAGAACGTACCTTCCGGGCACCGGATGCCCTCCTCCCGCCTG AGGGAGAGGGCCGGGATATCGGCAGCCGGCGCAATGGGGAGGACCTGCATTCCGGGCGCCGGAGATCATCGTTCACCCCGCGATCCGACCCCACAGCGCG CTGGCGTCGTCGTGGATCTTGAAACGCGGGAAAGCCAGGGCCTGGTCGTCGCCCTGTTCGATCTCGCGCAACTCGTCGAGCATGGCGCTCACTCCGACGT CCTCGAGGCGCCGCAGCAACTGTTCGTCGGTATAGCGGCGGAAAGGCTCGACCAGCCGGTCGAAGCCGTCGGTCATCAGCACGAAGGAACGCAACGCGGC GAGCGGCAAGGTCTCGCGCTGCACCTGGCCGAGCCAGCGGTCGCTGATGTCCAGCGCCCAGTAGCCCTCGGGCTTGTTCATCAGCAGGCGGTTCTGCCGC
|
|
Amino Acid Sequence |
>putative hydroxamate-type ferrisiderophore receptor
MPRPTFRPGLLALAIALAVPAPFLHAAPAEQASVRDYRIAAGPLAGTLNRIAAQAGLVLTLDPALAEGRSAHAVQGRFDAPGALREALKGSGLELVENAG GTYSLRKVPEDTLSLQAMTVSGAEEDPLGPTSGYVAKRSMTGTKTDTPILETPRSISVATRQQMTDRAVHNLDDAVRYMPGVVASSFGSDTRSDWLKVRG FKPTQFLDGLPMAVGVYNNPKLETWNLERVALLRGPASSVYGQTPPGGMLDMVSLRPQNVASHEVKAEVGNYNHKQVSFDSTGPLDDEGRFLYRVSGVVR DSNTQVDHIDDKRYNIAPSLTWNIDDDTRLTFLGQFNRDDTGITSQFLPLRGTKYDAPFGKVSHHKNLGDPDWEYYDRTYYWLGYAFERRINDVWQFRQN LRYLRNDLSFQGITAGTAHADGTLERSTTSVDEDVSQFVVDNNFQADFETGALRHTLLLGLDHNRTDNQYTSIFGSAPPSNVINPIYGQPIVKPDRSTAF YDYKQKTYQTGLYVQDQIALDNWRLTLGGREDWVHTGATFYNKGDATNTSRDKKFSGNAALSYIFDNGVAPYISYAESFQPTTGADMNSTSSLKPTEGKQ WEIGVKYQPVGSDSLFTAAVYDLRQENVSVSQNIGGTPVTSQTGEVKVSGIELEATSNVTDNLKMIGAYSYADTEVKKGQYAGNRLQQAPRNQASLWADY TWHEGTLNGFSVGAGARYVGSTYGDQANTYDGYAGSYTLYDAAVRYDLGQLNGSLKGVSVAVNANNLFNKDYLASCDGYYCYYGDQRSVVGSVSYKW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|