Pseudomonas aeruginosa B136-33, G655_29240
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa B136-33, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GATACGCTGGAAAGCGGCAACGACTGAGCCTTTCCCACGCCTTTCCATCTCCTTCTTCCTACCTGGCTGCGGTCCTGCCGCGGCCCGGATACGCTCGCCT GAAACCTGTGGAAAACCCCAGGGACAGGAGGGTAGATAAACCCGCCGAAGCTCTGTGCATAACTCCACATGTTGATAACGAGCCATTCCATCCACAGCTA AAAAACGCTTATCAACAGGGCCCATATAGGGTTTGGGACAGCCTTATCATTCGCTACAGGCTATGTATTTACTGGGCTCGACGTACTTATCAACAGAAAA GCCGCTGCCAAATAATAAACACAAGTTCTAAAAAGATATAAACATTCCTTTCCTTTTATTTTTTGTAAGCCCGCCGAGCCGTTTTGCTCCCTCGATCTGG ATTGGCTATTTTTTGTCCAGGAGTCTTCATTCAGGTTCGCTAAATCCTTATACTGTCCGGCTTTCCTGAATTCCTGCTTCTGAACAGGCCGAGGTGCGTG
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| DNA Sequence for Gene |
>G655_29240
GTGGATTTCCCTACCCGTTTTGACGTAATCGTGATCGGCGGTGGCCATGCAGGCACCGAAGCCGCACTCGCGGCTGCGCGCATGGGTGTGAAAACCCTGC TGTTGACCCACAATGTGGAAACCCTGGGGCAGATGAGCTGCAACCCCGCCATCGGCGGCATCGGCAAGAGCCATCTGGTCAAGGAAATCGACGCCCTTGG CGGCGCCATGGCCGAAGCCACCGACAAGGGCGGTATCCAGTTCCGCATCCTTAACAGCCGCAAGGGGCCGGCAGTGCGCGCCACTCGTGCACAAGCCGAT CGCGTGCTCTATAAGGCCGCTATCCGCCATACACTGGAAAACCAGCCGAACCTGTGGATATTCCAGCAGGCCTGCGACGACCTGATCGTCGAGCAGGATC AGGTCCGCGGCGTAGTGACCCAGATGGGCCTGCGCTTCCATGCTGACAACGTGGTCCTGACTACCGGCACCTTCCTCGGCGGACTTATCCACATCGGCCT GGAGAACTACTCCGGCGGACGCGCCGGCGACCCGCCGTCCATCGCTCTGGCGCGTCGTCTGCGTGAATTGCCGCTGCGGGTCGGCCGTCTGAAGACCGGC ACGCCGCCGCGGATCGACGGGCGCAGCGTGGACTTCTCGGTGATGACCGAGCAGCCGGGCGACACGCCGATCCCGGTGATGTCCTTCCTTGGTTCGAAGG AACAGCATCCCGAGCAGGTCAGTTGCTGGATCACCCATACCAACGCACGGACCCACGAGATCATCGCCGCCAACCTCGATCGTTCGCCGATGTATTCCGG TGTGATCGAAGGCATCGGCCCGCGCTACTGCCCGTCGATCGAAGACAAGATCCATCGCTTCGCCGACAAGGAAAGCCACCAGGTCTTCCTCGAGCCGGAA GGCCTGACGACCCACGAGCTGTATCCCAACGGCATTTCCACGTCCCTGCCGTTCGACGTGCAACTGCAGATCGTGCGTTCCATCCGTGGCATGGAAAACG CCCACATCGTGCGGCCGGGCTATGCGATCGAGTACGACTTCTTCGATCCCCGCGATCTCAGGTACAGCCTGGAGACCAAGGTCATCGGCGGCCTGTTCTT CGCCGGCCAGATCAACGGCACCACCGGCTACGAGGAAGCAGGCGCCCAGGGCCTGCTGGCCGGCGCCAATGCTGCGTTGCGTTCGCAGGGCAAGGACAGC TGGTGCCCGCGCCGTGACGAGGCCTACATCGGCGTGCTGGTGGACGACCTGATCACGCTCGGCACCCAGGAGCCGTACCGCATGTTCACCTCGCGGGCGG AATACCGCCTGATCCTCCGCGAGGACAACGCCGACCTGCGTCTCACCGAGAAGGGACGCGAGCTGGGCCTTGTCGACGATCGGCGCTGGGCTGCCTTCGA AGCCAAGCGCGAAGGTATCGAACGCGAGGAACAGCGGCTGAAGAGCACCTGGGTGCGGCCGAATACCCCGCAGGGCGACGCCATCGCCGAGCGCTTCGGT ACGCCGCTGACCCATGAATACAACCTGCTCAACCTGCTGAGCCGCCCCGAGATCGATTACGCCGGCCTGGTGGAGATCACCGGCGACGCTGTGGATAACC CCCAGGTGGCCGAGCAGGTGGAGATTCGCACCAAGTACGCCGGCTACATCGACCGCCAGCAGGAGGAAATCGCCCGGCTGCGCGCCAGCGAAGATACCCG CCTGCCTGTGGATATCGATTACCTGGGGATTTCCGGCCTGTCGAAGGAAATCCAGAACAAGCTGAACCAGGCCCGTCCGGAAACCCTCGGACAGGCTTCG CGAATCCCCGGCGTCACGCCGGCTGCGATTTCGCTGTTGTTGATCCACCTGAAGAAGCGTGCCTCTGGCCGCCAACTGGAGCAGAGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGTCTGCGGTAACCCAACATCACGCCGACGAACTCGCGCGCGGTGCTGACGAGCTAGGCGTCGCTCTCGACGCCGACAAGCAACGCCAGCTGCTGGCCTA CCTGGCCCTGCTGATCAAATGGAACAAGGCCTACAACCTGACCGCCGTGCGCGACCCGGACGAGATGGTTTCGCGCCACCTGCTCGACAGCCTGAGCATC GTGCCTTACGCCGAGGCTGGGGATAACTGGCTGGATGTCGGCAGCGGCGGCGGCATGCCCGGCGTGCCGCTGGCCATCCTGTTCCCGGAAAAGCGCCTGA CCCTGCTCGACAGCAACGGCAAGAAGACCCGCTTCCTGACCCAGGTGAAGCTCGAGCTGAAGCTGGCCAACCTCGAAGTCGTGCACAGCCGGGTGGAAGC CTTCCGTCCCGAGAGCCCCTTCGATGGCATCGTTTCCCGCGCTTTCAGCAGCCTGGAGGACTTCGCCAACTGGACCCGCCACCTCGGTGGCCAGGAAACC
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| Amino Acid Sequence |
>tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
MDFPTRFDVIVIGGGHAGTEAALAAARMGVKTLLLTHNVETLGQMSCNPAIGGIGKSHLVKEIDALGGAMAEATDKGGIQFRILNSRKGPAVRATRAQAD RVLYKAAIRHTLENQPNLWIFQQACDDLIVEQDQVRGVVTQMGLRFHADNVVLTTGTFLGGLIHIGLENYSGGRAGDPPSIALARRLRELPLRVGRLKTG TPPRIDGRSVDFSVMTEQPGDTPIPVMSFLGSKEQHPEQVSCWITHTNARTHEIIAANLDRSPMYSGVIEGIGPRYCPSIEDKIHRFADKESHQVFLEPE GLTTHELYPNGISTSLPFDVQLQIVRSIRGMENAHIVRPGYAIEYDFFDPRDLRYSLETKVIGGLFFAGQINGTTGYEEAGAQGLLAGANAALRSQGKDS WCPRRDEAYIGVLVDDLITLGTQEPYRMFTSRAEYRLILREDNADLRLTEKGRELGLVDDRRWAAFEAKREGIEREEQRLKSTWVRPNTPQGDAIAERFG TPLTHEYNLLNLLSRPEIDYAGLVEITGDAVDNPQVAEQVEIRTKYAGYIDRQQEEIARLRASEDTRLPVDIDYLGISGLSKEIQNKLNQARPETLGQAS RIPGVTPAAISLLLIHLKKRASGRQLEQSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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