Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGAGAAACAGGTGATGCCGCCCTTTACCTGTTCGGCGATGGCCAGCTCCGTGCCGTCGCGGATGAAATCCTCGCTGACCCATTGTCCTTCGGCCGGCCA GATGTGGTCCTGCAGCCAGGTCATCAGCGGCAGGTCGTCGGCGAGACCGCGGAACAGACTCATTGCCGAATGGCCGTGGGCGTTGACCAGGCCGGGGGCG AGCAGCATGCCGGGCAATTCGCGGATTTCCGTGGCGCCATGGCGCATGGCCTGCTCGCGCGGCGCGACCAGGGCGATCTGGCCGTCGCGGATGCCCAGCG CGTGATCGCGCAGCACCACCCCGGCGGGCTCCACGGGGACGATCCAGGTCGGCAGCAGGAGGAGGTCGAAGGGGTTACGGACGTTGGGCATGGCGGCGCA TCCTGGGCGCAGAGCGGGAAGCCGGAAGTATACCCGAGCGTCCGCGGCTGGGGCTCGTTATAATCCGCAGCTTTTCCGTGATTCAGCGAGAGGTGTGTGC
|
|
DNA Sequence for Gene |
>NQ74_RS04960
ATGCGAGAGCGACTGCTGGCGGCCGAGCGGGTCAAGGCGATCGAGTGGCGGGACGGTACGCTGCGGTTGCTGGATCAGCGCCTGCTGCCCCAGGAGGAGG TCTGGCTCGAACACGAGTCGGCGGCCGAGGTGGCCAAGGCCATTCGCGATATGGTCGTGCGCGGCGCGCCGGCCATCGGCATCAGCGCCGCCTACGGCAT CGTCCTTGGCGCCCGCGCGCGCCTGGCGCAGGGCGGCGACTGGCGCGCCGCGCTGGAGGAGGACTTCCGCCTGCTGGCCGACTCGCGACCCACGGCGGTC AACCTGTTCTGGGCGCTGAACCGCATGCGCGACCGTCTGGAGCGAATGAAAGAGGGCGACCAGCCGCTGGCGGTGCTGGAAGCCGAGGCGATCTCCATCC ATGAAAGCGACCGCGAGGCCAACCTGACCATGGCCCAGTTGGGCATGGAGCTGATCCGCAAGCAGCAGGGCAGCCCGCAGAACATCCTCACCCACTGCAA TACCGGCGCCCTGGCGACCGGCGGGTTCGGCACCGCGCTGGGGGTGATCCGCGCCGCGCACCTGGAAGGCCTGGTCAATCGCATCTACGCCGACGAAACC CGGCCCTGGCTCCAGGGCTCGCGACTGACCGCCTGGGAGCTGGCCAACGAAGGCATCCCGGTCAGCCTGAACGTGGATTCGGCCGCCGCGCACCTGATGA AGACCGAAAACATCACCTGGGTCATCGTCGGCGCCGACCGCATCACCGCCAATGGCGATGTCGCCAACAAGATCGGCACCTACCAGTTGGCAGTCAACGC CATGCACCACGGCGTGCGCTTCATGGTGGTGGCGCCGAGTTCGACCATCGACATGAACCTGGAGAGCGGCGAGGACATCCCGATCGAAGAGCGCGACGGT CGCGAGCTGCTGGAAATCGGCGGGCGACGGGTAGCGGCCGAGGTCGATGCCTACAATCCGGTATTCGACGTGACCCCGGCGGACCTTATCGATGCCATCG TGACCGAGCGTGGCGTCGTCGAGCGTCCCGACGCCGAGCGCATGGCCGCCCTGATGAGCCGCAAGCGCCTGCATTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACGAGGCGACTGGAGGTCGTCCCCGCCAGGGCCTTTGCCTTGGGCTGGGGCGTGGGCTGTGGTAAGCTCCGACGGTTATTCGAGCGCCCCGCGGAGGGGC CTCGAGAGTGCGCGAATCCTTGACTCAAGTCGTTGATTTGTAGTGAGTTGGCGCTGCTCGGGCATGCGCCGACCTACTTCGTTTGCCTCAGGATCGAGGC GGCGAAGTTCCACCAGAAAAAGGAACCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATTCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTATC TCGACTACGCGATGAGCGTGATCGTCGGGCGGGCCCTGCCGGATGCACGTGACGGCCTGAAGCCGGTGCACCGCCGTGTGCTTTATGCCATGAGCGAGCT GGGCAACGACTGGAACAAGCCCTACAAGAAATCCGCCCGTGTGGTCGGCGACGTGATCGGTAAGTACCACCCGCACGGCGACACCGCGGTCTACGACACC
|
|
Amino Acid Sequence |
>methylthioribose-1-phosphate isomerase
MRERLLAAERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIVLGARARLAQGGDWRAALEEDFRLLADSRPTAV NLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHESDREANLTMAQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADET RPWLQGSRLTAWELANEGIPVSLNVDSAAAHLMKTENITWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTIDMNLESGEDIPIEERDG RELLEIGGRRVAAEVDAYNPVFDVTPADLIDAIVTERGVVERPDAERMAALMSRKRLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|