Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGGCCTGATGCAACCCTGGCGCTTCATCCGTATCACCGAGCCGGCGTTGCGCCAGGCCATCCACGGGCTGGTCGAGGACGAACGCGGACGCACCGCCG AAGCCCTCGGCGAGCGCTCCGACGAGTTCATGCGGCTCAAGGTAGAGGGCGTGCTGGATTGCGCCGAACTGCTGGTCGCCGCTCTGATGGACGACCGCGA GCGCCATGTGTTCGGTCGCCGGACCCTGCCGCAGATGGACCTGGCGTCGCTCGCCTGCGCGATCCAGAACCTCTGGCTGGCCAGTCGCGCCGAGGGCCTG GGGATGGGCTGGGTATCGTTGTTCGATCCGGCCGCGCTGGGCGAGTTGCTCGGCCTGCCGCCCGGCAGCGAGGCGGTGGCGGTGCTCTGCCTGGGCCCGG TGGCGGAGTTCTACCCGGCGCCGATGCTGGCGCTGGAGGGTTGGAGCGAACCGCGTCCGCTGGCCGAGCTGGTCTACCAGAACCGTTGGGGCGAGCGAGC
|
|
DNA Sequence for Gene |
>NQ74_RS03085
ATGAGCGCACTGCTGGGTATCCTCGGCGTGGCGCTGGATGCGCGCTTCGGCGAGCCGCAGGGCTGGCACCCGCTGGTCGCCTTCGGCCGCCTGGCCGATC GCCTGGAGCGCCGTTTCAATCGCTCGCGCCTGGCCGGCGAGGGCGATCCCGGGGTCGGCTGGCGCAGCCACGGGGTGACCGCTTGGGTCCTCGCGGTACT GCCGCTGACCCTGCTGGCCTGGGCGCTCGCTGAACTTCCCTACCTCGGCTGGCTGGTCCAGGCCCTGGCGCTGTACGCCGCGCTCGGCCTGCGCAGCCTC GGCGAGCACGCCGAACCGGTGGCGCTGGCCTTGCGCGCCGGCGACCTGGACGAGGCGCGGCGACGTGTCGGCTATCTGGTCAGCCGCGATACCCGCGAAC TGGACCAGGCCGGGGTCGCCCGCGCGGCCACCGAATCGGTACTGGAGAACGGCAGCGACGCGGTTTACGCCGCGCTGTTCTGGTTCGCCGTGGCCGGCGC GCCGGGGGTGGTGCTGTATCGCCTGAGCAATACCCTGGACGCGATGTGGGGCTACCGCAACGCGCGCTTCGAGCGCTTCGGCTGGGCCGCGGCGAAGATC GACGACATCCTCAACTACCTGCCGGCGCGGCTGGTGGCGCTGACCTACGCGCTGCTCGGCGGCACCCGCCAGGCCCTGCGCTGCTGGCGCGAGCAGGCGC CGCAATGGGACAGCCCCAACGCCGGCCCGGTGATGGCCGCCGGCGCCGGTGCGCTGGGCGTGTCCCTGGGCGGCGCGGCGATCTACCACGGCGAGCTGCA CCAGCGGCCGCTCCTCGGCAGCGGCCCGCAGCCGCAGGGCCGCGACATCTATCGGGCCCTGGCGCTGGTACGCCAGGGCGTGCTGTTCTGGCTGCTGGTG CTGGCCGGACTCTGGGCCATGGGGTGGCTGCATGCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACACGGAGGGCGGTTGCGCGAGGCGGCGCGCCGCTACGACATTCCGCTGGCGGACTGGCTGGACCTGTCCACCGGCATCGCGCCCTGGCCGTTTCCGCTG CCGGCGATCCCCGAGCAGGCCTGGACCCGCCTGCCGGAGAGCGACGACGGCCTGGAAGCCGCCGCCTGCCTCTACTACGGCGCCGAACGGGTATTGCCGC TGGCCGGCAGCCAGGCGGCGATCCAGGCCCTGCCAAGGTTGCGGCGGGGCGGGCGGGTCGGCGTCCTGTCGCCGTGCTATGCCGAGCACGCCCACGCCTG GCGCCAGGCCGGGCACCTGGTGCGGGAGATCGGCGAGGCCGAGGTCGAGCCCTATCTCGACAGCCTCGACGTGCTGCTGGTGGTCAACCCGAACAACCCC ACCGGGCGGGTCTTCGAGCCCGCCGAGCTGCTGGCCTGGCATGCCCGCCTGCAACGTCGCGGCGGCTGGTTGCTGGTCGACGAGGCGTTCATGGACTGCA
|
|
Amino Acid Sequence |
>cobalamin biosynthesis protein CobD
MSALLGILGVALDARFGEPQGWHPLVAFGRLADRLERRFNRSRLAGEGDPGVGWRSHGVTAWVLAVLPLTLLAWALAELPYLGWLVQALALYAALGLRSL GEHAEPVALALRAGDLDEARRRVGYLVSRDTRELDQAGVARAATESVLENGSDAVYAALFWFAVAGAPGVVLYRLSNTLDAMWGYRNARFERFGWAAAKI DDILNYLPARLVALTYALLGGTRQALRCWREQAPQWDSPNAGPVMAAGAGALGVSLGGAAIYHGELHQRPLLGSGPQPQGRDIYRALALVRQGVLFWLLV LAGLWAMGWLHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|