Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGAAGCTCGACGTGACCTACCGCATGGCCTGGTTCCGCGGCCTGAAGACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCCACCA TCAACACCGGCAAGCTCAACGCCGTGTCGGCCGGTGGCAACGACGGCCTGCAAGCCGCCCCGGCCGCCGAGCCGAAGCCGGCGCCGGTGCCGCAGGCATG CAGCATCGACAACCCCGACTGCGAAGCCTGCCAGTGATCGCGCGTCGCTGAACGGCGTCCGTGTCGTGGCCGGGCAAGCCGGACTCCTCCCGTGAGTCCG GCTTGCCCGGCGCCTGACGGTCGCTCGTCCAGCGCCACGCTGGCAGCGCAAGGCCCCTCGCCAGGGCCAGGAACAATCCCCTTCTTCCCTCCGGGGGAGA AGAACGGCCCGGCCAGACCGTGCCGGACCACCGCTTTCGCGTGCACCTCACGCCCCATATCCAGGCCGCCGAGACGGCCGCCAGACCAGGAGAGAGCAAG
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DNA Sequence for Gene |
>NQ74_RS02420
ATGCTGAGCTGGGACGAATTCGACAAAGAAGACCCGACCGAAGCCAAGGCCGCGCCCGCCGCCGCCCAGGCCGTTGCCCAGGGCCATGACAAGCTGGACG ACGAAGCCGCCGGCTCGGTGGAAGAAGCGCGCGCCGTTTCCGCCGACGACTCCGACGCCGTCGCCCGCGCCAAGAAGGCCCTGAACGACCTCGACATCCA GGAAGGCCTGGACGATCTCGAAGGCTCCGCCGCGCGCGTGCAGGTCGGCGACAAGCAGATGATCAACGCCCGCGCCGACCTCAACCAGCTCGTCCCCTTC AAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCGCAGGAAGTCAACATGAACGCCGACATCGCCCTGTGGAAGAGCA AGGACGGCCTCAGCGAAGACGAGCGGCGCATCGTCATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTCGCCAACAACCTGGTGCTGGCCGT GTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAGTCG CTGGGCATGGACGAGGGCGAGATCTTCAACATGTACCACGAGATCCCCAGCGTGGCGAAGAAGGCCTCCTGGGGCCTGAAGTACACCCGCTCGATCTCCG ACCCGATGTTCCAGACCGGCACCCCGGAAACCGACCGCCAGTTCCTGCGCAACCTGATCGCCTACTACTGCGTGCTGGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCCGAGCAGTTCCAGTACATCCTCCGCGACGAGTCGATGCACCTGAACTTC GGTATCGACGTGATCAACCAGATCAAGATCGAGAACCCGCACCTGTGGGACGCCCAGATGAAGGACGAGGCGACCCAGATGATCCTCCAGGGCACCCAGC TGGAGATCGAATACGCGCGCGACACCATGCCGCGCGGGGTGCTGGGCATGAACGCGGCGATGATGGAGGACTACCTGAAGTTCATCGCCAACCGGCGCCT GACCCAGATCGGCCTGAAGGAAGAGTATCCGGGGACCACCAACCCGTTCCCGTGGATGTCGGAGATCATGGACCTGAAGAAGGAGAAGAACTTCTTCGAG ACGCGGGTTATCGAGTACCAGACGGGCGGAGCACTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GATTCTCGATTTAGGTCAAGACCGTTAGACGCTGTCGCCGGAAAGGGATTTCGGGACAGTGGTAGAGATGAAGAGCCCCGCCTTATGCGGGGTTCTTCAT TAAAGAGAAATAAAAACCCAAGGTGTTCAGCAAGTTAATCCACCAAATCAAATAGAAGATATGTGCCAAACTCACTATCCCCAAGACACCATCGACAGAC TATTTGAGGACTGTCAAACAGCCCTAGAAAACAAGAAATAAAAACATGCCCAACCATTCGCTCAATCTGAAATCTCCGTAGGGCGAGTAACGCGCAGCGT TATCCGCCGGCTGGCCACGGTACGCTCCGAAATCCTTCTGGATACACGGACGATCCCCAATGCCAAGCTACCGACGAACCTGGGTCCCCGGCGGCACCTA TTTCTTCACAGTCACCCTGCATGACCGCCGCTCCAACCTGCTGACCCGCGAAATCGACCTGCTGCGCCGCGTGGTCGCCCAGACCAGGCGCCGGCACCCC
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Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDPTEAKAAPAAAQAVAQGHDKLDDEAAGSVEEARAVSADDSDAVARAKKALNDLDIQEGLDDLEGSAARVQVGDKQMINARADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPMFQTGTPETDRQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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