Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCAAGGCCAACGGCTACCGCGACTATGCGGCAGACACCGTGTGGATCCTGGAACTGGTCACCGGCGCCCAAGGCGCCGGCTTCTCCCTGGAGGAGATCGC TCGCCTGCTGCCGAGCGGCGACGGCGCCTGGCAGCACGGCGAGCTGCTCGAAGGCTTGCGCCGCAAGGTGGCCGAAATCGAGGCCCTGCAACGACGCCTG GAACAGAACAAGGCGCAATTGCTGGTGGCCATCGAGAGCATCGAGAACAAGCCGGACGGCCTGCAGTGCACGGAAAACACCCAGCGCGTGCTGGAGCGCC TGCGCGAGGAAGGCCCTCCACAGACGGTCGGGCGTCCACGGCAAACCCGCTCGCGGGGGGCCTCTTCCACGCCGGCGGAGCAGCGGCTTTCCGACGCTTG ACCTTGAAGTCGACTTGAATCTTAGAGTGACGCCAACCCACCCGGACAGCCTGCCGAAACCGGCTGCCGACGGGATCACTCACCGAGGAAGGTCAACGCA
|
|
DNA Sequence for Gene |
>NQ74_RS28930
ATGACCAAGCGCATCCTGCACGTCGTCACCAACGTCGCCCACTATGCCGATCCGACCCAGCCCACCGGGCTGTGGCTGTCGGAGTTGACCCATGCCTACG AGACCTTCGCCGCCCGGGGCTACCAGCAACGCCTGGTCAGCCCCCGCGGCGGCGAGTCGCCGCTGGAGCCGCGCGCCCTCGGCTGGCCCCACGCCGACGC CAGCGCCAAGGCCTGGCTGGCCGACGAGGCACGCCTGGCGCTGCTGGCCGACACTGCCGCTCCCGAGCAGGTCGACGCGGAGGCGTTCGACGCCATCTAT TTCACCGGCGGCCACGGCGTGATGTGGGACTTCCCCGACGACGCCGGGCTGCAGCGCCTGACCCGCGAGATCTACCAGCGCGGCGGCATCGTCTCGTCGG TCTGCCACGGCTATTGCGGCCTGCTCAACACACGCCTGGACGATGGCCGCCTGCTGGTCGCCGGGCGCCGCCTGACCGGCTACTCCTGGATCGAGGAAGT GCTCGCCGGGGTCGCCCGCAAGGTGCCGTACAACGTCGAGGAAGAAATGAAACGACGCGGCGCGCTCTACGAAAGAAGCCTGCTGCCGTTCACCAGCAAG GTGGTGGTCGACGACCGCCTGGTCACCGGGCAGAACCCGCAGTCGGCCAAGGCCACGGCCGAGCAGGTGGCCGCCCTGCTCGGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACGCGCGGCGCGTCAGTCCTGCGCGCGCCTCATCTGGAAGTCGTGGCGCTGCTTGCCGATGAAGAACGACATCTGCATCGTGCCGTCGGCCAGGGGCCGC AGGATCGTCGCAGTGCTGGTCTTGTGGTAGGGGTCGAACTCGTCGAAGGGCGACCTGACATGGATGGAGCCGCCATCGACGCCTTGCGGGCTGCGCGACG CGGCGGCCTACGCCAGCGGCTTGAGCATGAGGAAGTTGCGCACGCTGTAGTAACCCTGCGAATCCTGCCAGTCGAGAGCGGCCAGGTTCTGCATGCCGGC CTCCCACGGCTGGTTGTCGAACAGCGCCTCCACCGTGCGCTGGTTGCCGAAGGCACAGAAGAAATGCCGGAACCAGTGCAGGCGCGCGTCCAGCGGCTCG GCGCGGATCGCCCGCTCGATGCTCGGGAACAGCCCGGCCGGCAGCGGCGGCGCCTTGCCCTCGGCGCCGCGCAGGCCGAGGTTGCCGATATGCACCTCGA
|
|
Amino Acid Sequence |
>dimethyl sulfoxide reductase
MTKRILHVVTNVAHYADPTQPTGLWLSELTHAYETFAARGYQQRLVSPRGGESPLEPRALGWPHADASAKAWLADEARLALLADTAAPEQVDAEAFDAIY FTGGHGVMWDFPDDAGLQRLTREIYQRGGIVSSVCHGYCGLLNTRLDDGRLLVAGRRLTGYSWIEEVLAGVARKVPYNVEEEMKRRGALYERSLLPFTSK VVVDDRLVTGQNPQSAKATAEQVAALLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|