Pseudomonas aeruginosa AZPAE14509, NQ74_RS28255

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_35, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCTCCGACGACTGGCGCTCCCCGGTCGCCGGCTGAGCCGCGACCGCCGCACGCGGCCAGCCTCGCTGGCCGTCGTGCCCTCGATGACCCACAGCGCCGT GGCCAGGAAAGCCCGCGCCGGGTCGATGCCGCTTTGTTTGTTGTAGGCAGCTTCCGATCGAGCCTGCGCGCCCTTGTCTCGCCCGCGCCAGGCAGGACAA TCGAATCGGTCGCCTGCGCCAGTGAGGGACAACGG
DNA Sequence for Gene
>NQ74_RS28255
ATGTTCGCAGCAGCCAACCAGACCCATTTCAGCCTCGCCATCGACGGCCTCGCCCTCGACCTGCAGGTGCTCTCCTTCAGCGGCCGCGAAGCCATCAGCC AGCCGTTCGCCTTCGACCTGGAGCTGGTCGGCGAACGCCCCGTGCCGGACCTCGAAAGCCTGCTGCACAAACCCGCCTTCCTTACCCTCGGGCCCGCCGG CAACGGTATCCACGGCCTGGTGCGCAGCGCCGGACAGGGCGACTCGGGCAAGCGCCTGACCCGCTACCGCATCACCCTCGTCCCGCAACTGGCCTACCTC GCCCAGCGCACCAACCAGCGCATCTTCCAGCACCTCACGGTGCCGCAGATCGTCGGCCGGGTGCTGGAGGAACACGGTATCCTCGCCGACGCCTACCGCT TCCAGCTCGGCACCCGCTACCCCGAGCGCGAATACTGCGTGCAGTACGACGAGAGCGACCTGCAGTTCGTCCAGCGCCTGTGCTGCGAGGAGGGCATCCA TTTTCATTTCCAGCACAGCGCCACGGCGCACCTGCTGGTGTTCGGCGACGACCAGACGGTGTTCCCGCGGCTCGCGCCGGTGGCCTACCAGCAGGACTCC GGCCTGGTCGCCGACCGGCCGGCGGTCAAGCGCTTCGGCGTACGCCTGGAAACCCGCACCAGCCGCGTCACCCGCCGCGACTACGACTTCGAGAAACCGC GCCTGACGCTGGAAAGCGCCGCCCGCGGCGAAGCCCGGCCGGACCTCGAGGACTACGACTATCCCGGTCGCTTCGTCGACCGCGAGCGCGGCAAGCACCT GGCCAGGCGTGCCCTCGAACGGCAGCGCAGCGACTACCGCCTGGCCGAGGGCCGCAGCGACCAGCCGTTGCTGCTCAGCGGCCACTTCCTGCCGCTGGCC GCCCATCCCCAGGCGGGCTGGAACGACCTCTGGCTGCTCACCGAGGTGATTCACGAGGGGCGGCAGCCGCAGGTGCTGGAAGAAAGCATCGTCTCCGACG TCTCGGCGAGCCCGGACGACTTCCGGCAGGGTTACCGCAACCGCTTCCAGGCCACGCCCTGGGAGGCGTTCTTCCGTCCCCCGCCGACGCCGCCGAAGCC GCGCATCCTCGGCACGCAGAGCGCGGTGGTGACCGGTCCGAAGGGCGAGGAAATCCACTGCGACCGCTACGGTCGGGTGAAGGTGCAATTCCACTGGGAT CGCGAGGGCCAGGCCGACGACAGCAGCAGTTGCTGGTTACGCGTTGCCTCCGGCTGGGCGGGAAAGAACTACGGCGCCATCGCCATCCCGCGGGTCGGCA TGGAGGTGCTGGTGACCTTCCTCGAAGGCGATCCCGACCAGCCGCTGGTCACCGGCTGCCTGTTCCACAGGGAACATCCGGTGCCCTACGAACTGCCGGC GCACAAGACCCGCAGCGTCTTCAAGAGCCTCAGCAGTCCTGGCGGCGGTGGCTACAACGAGCTGCGCATCGAGGACCGCAAGGGCCAGGAGCAGATCTTC GTCCATGCCCAGCGCGACTGGGACGAAAACATCGAGCACGACCAGAAGATCCGCGTCGGTCACCAACGCCACGACACCGTGGAGGCGAACAGCTACAGCG AGTTCAAGGCCGAGGAACACCGCACCACCCACGCCGAGCGCAAGGTGGAGATCCGCGCCAGCGACCACCTCACCGTAGCCAACGACCAGCACCTGAAGAT CGCCAGCGGCCAGTTCGTCGAGGCCGGCCAGGAGATCCACCTGAGCAGCGGCCTGAAGGTGGTGCTGGAGGCCGGCGCCGAACTGACCCTGAAGGGCGGT GGCAGCTTCCTCAAGCTCGACGCCAGCGGCGTGACCCTCTCCGGGGCCAACGTCCGGGTCAACTCCGGCGGCAGCCCGGGCAGCGGCAGCGGCGCGGCGC CGCTGTTGCCGGGGCCGCTGCGGCAGGCCGACGCGGACAATCCGGGCGACCTGCTCATCCGCGCGCAGCGCCAGGCATTGCTGCAGAAGAAACCGATCTG CGCCATCTGCGAAGCGGCCAGGGCGAAAACCGATGCGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCGATGCTGCCCGCCTTGCCCGCCGACCTGCCCTGGACGCTGAATGCCTACCTGCTGCTCGATGGCGTCAGCGTCACGGAACTGCCGCGCAAGCTCTAC CAATGGAGCGATACTCCGACCTTCGAGCCGCTGTACCGCGACAGCCGCTGGCAGGAACTGCTGGACCTGTCGCCCTGCCTGGTCGCCCTCGACGGCCGCC AGGACCCTATCCTGCAGGCGTTCCTCGACAACGCCGCACAGGAATGGGGCTACCTGCTCTTCGCCCGCGTCAGCTTGCCGATCCTGTCGCAGCACCTGCG GGACCTTCTGTGCGTCCAACCTCCCCATGGCGATCCGGTGCTGCTGCGCCTGGCCGACCCGGCAGTGATGCATAGCCTGCTGGAACATGAACGCATGGAA CTGTTCGGTCCGATCGAGCAGGCATGTGCTCCAGATGCCCTGGAAACCCGCTGGTGGCAACACCGGCGAAGCGGCTCGGCGATCGCTCGCGACCGCACGC
Amino Acid Sequence
>type IV secretion protein Rhs
MFAAANQTHFSLAIDGLALDLQVLSFSGREAISQPFAFDLELVGERPVPDLESLLHKPAFLTLGPAGNGIHGLVRSAGQGDSGKRLTRYRITLVPQLAYL AQRTNQRIFQHLTVPQIVGRVLEEHGILADAYRFQLGTRYPEREYCVQYDESDLQFVQRLCCEEGIHFHFQHSATAHLLVFGDDQTVFPRLAPVAYQQDS GLVADRPAVKRFGVRLETRTSRVTRRDYDFEKPRLTLESAARGEARPDLEDYDYPGRFVDRERGKHLARRALERQRSDYRLAEGRSDQPLLLSGHFLPLA AHPQAGWNDLWLLTEVIHEGRQPQVLEESIVSDVSASPDDFRQGYRNRFQATPWEAFFRPPPTPPKPRILGTQSAVVTGPKGEEIHCDRYGRVKVQFHWD REGQADDSSSCWLRVASGWAGKNYGAIAIPRVGMEVLVTFLEGDPDQPLVTGCLFHREHPVPYELPAHKTRSVFKSLSSPGGGGYNELRIEDRKGQEQIF VHAQRDWDENIEHDQKIRVGHQRHDTVEANSYSEFKAEEHRTTHAERKVEIRASDHLTVANDQHLKIASGQFVEAGQEIHLSSGLKVVLEAGAELTLKGG GSFLKLDASGVTLSGANVRVNSGGSPGSGSGAAPLLPGPLRQADADNPGDLLIRAQRQALLQKKPICAICEAARAKTDAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site