Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_27, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGACACCGGCGCCGACATGCACGACAAGTACAAGGAAACCTCGCGCGGGGGCCTGGCGGTGAACGCCATCGAGTGCTGAACCGGAATTGCTCACGAAAC GATCGAGACGCCACTTTTTGGCGCATATGACGCGTGACCGGGCGGTCGCCATCCGTCACACTGCGGGGTAACGGCTCGCCGCCCGTCGTTACCTTTGTCG CCACGGCCGCTGCCCCGTCTTCTCGCCGGGGGCCGCCCTGGTGCTACCGAAATGCCCAGGCGCGCGGCGCGCCGCCAGCCGTCGCCCATGCTGTCGTTGT GCCAGGCCCGAGTGGAAATGCCGGGCTAAAGCCTTCCGGCTTTTTTGATTGAACGCCCAATCAATATAGGCATGGCATTTGCCTTGCTCTGGTTACAAGC AACGCCGACGGCGTGGCCCAAGCAGCCACCCGGAAATTCCAACAATCATAAAAAAAAGCCTCGTGAGAGGCCTGCTTGCTCAGCGTGAGGAGATACACCC
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DNA Sequence for Gene |
>NQ74_RS22485
ATGACCACGTACGCGCCCGGAGTTCCGCCACAGAACCGAAATCCGCAGTCCATCGGCTTCCTGCTGCTGGATAACTTCACCCTGATCTCCCTGGCCTCGG CGGTGGAACCGTTGCGCATGGCCAACCAGCTCTCGGGACGCGAACTCTACCGCTGGCATACGCTGAGCCTGGACGGCCGCCAGGTCTGGGCCAGCGATGG CCTGCAGATCACCCCCGACGCCGGTACCGACAACGCCCCGGCAGTGGATTGCGTGATCGTCTGCGGCGGCGTCGGCATCCAGCGCAGCGTCACCCGCGAG CACGTCACGTTCCTCCAGGCCCAGGCCCGCCAGGGTCGGCGCCTCGGCGCGGTGTGTACCGGCAGTTGGGCGCTGGCCCGCGCCGGCCTGCTCGACGGCT ACGATTGCAGCGTGCACTGGGAATGCCTGGCGGCGATGCAGGAAGCCTTCCCCCGGGTGGCCATGAGCACCCGCCTGTTCTCCATCGACCGCAACCGCTT CACCTCTTCCGGCGGCACCGCGCCGATGGACATGATGCTGCACCTGATCGGCCGCGAGCATGGCCGCGAGCTGTCGGCGGCGATCTCCGAGATGTTCATC TACGAGCGCATCCGCAACGAGCAGGACCACCAGCGCGTGCCGCTCAAGCACATGCTCGGCACCAACCAGCCGAAGTTGCAGGAGATCGTCGCGCTGATGG AGGCCAACCTGGAGGAACCGATCGACCTCGACGAACTGGCGGTCTACGTCAACGTCTCGCGTCGCCAGCTCGAGCGGCTGTTCCAGAAGTACCTGCACTG CTCGCCGTCGCGCTACTACCTGAAGCTGCGCCTGATCCGCGCCCGCCAGTTGCTCAAGCAGACGTCCATGTCGATCATCGAGGTGGCCTCGGTCTGCGGC TTCGTCTCCACCCCGCACTTCTCCAAGTGCTACCGCGAGTACTTCGGCATCCCGCCGCGTGACGAGCGCCAGGGCCAGCCGCTGGGCCAGCCGGTGGTGC TGATGCCGATCCCGCAGGACCTGGCGCTGATGCCCAACTCCTCGGCGCTGTCGGCCCTGAGCCAGGCGCAGGGCGAGTCTACCTTCGCCAGCGTGCGGAT CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCGCGTCCCTGCCCGCCCCGTCCACGGGGCGGGCAGGGCCTTGTCAGCCCCGCGGCACCAGCGCCGGCAGCAGTTGCCGGGAAATCGCCTCGCGCACC GCCGGCAGCAGCGTGGCGTGCCCGCCGAGCATGTCCTCCACCAGCCGCCGCAGCGCCTGGGCGCGCTCCGGGCTGAGGCCGCGCACGGCGTATTCGCAGG CCTGCTCCGGAGTCGAGTCCGGCGGCACGCTGAAGCCCAGCGCCTGCAGGCGTTCGCGGAAATCGTCCTGGTCGATCAGATCGGCGTGCATCATCGCGGC AGCTCCTTCGATGGGGATTGCCATCGATTCTGCTGAGCCCACGTCGCTCCCGGCAAGGGGGCTGTCCCGCCTGGACATGGGCAGGTCGTTTTCGGCTAAT TCGACCGTCAGCGACACCGCCACAATCACCTCCAGCGGCTTGCGGAATGCAGCGGACGGCTTCCGGAAAACGCCAGACTCACACTGAGGGCCGTTCCTGG
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Amino Acid Sequence |
>AraC family transcriptional regulator
MTTYAPGVPPQNRNPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLSLDGRQVWASDGLQITPDAGTDNAPAVDCVIVCGGVGIQRSVTRE HVTFLQAQARQGRRLGAVCTGSWALARAGLLDGYDCSVHWECLAAMQEAFPRVAMSTRLFSIDRNRFTSSGGTAPMDMMLHLIGREHGRELSAAISEMFI YERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVNVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTSMSIIEVASVCG FVSTPHFSKCYREYFGIPPRDERQGQPLGQPVVLMPIPQDLALMPNSSALSALSQAQGESTFASVRI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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