Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_20, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGGCCGTTCACCGCCGACGGCAGCTTGCCGGGCGCGGGCGGCTGTTTCGACGGAGCGGCCGGTACGGCGGGCTCGACCTGGATCGCGGGAATTCTTTCG CTCATTTTTCGTAGGCCCATCAGGCTGGAGAGGCGGTTGCGACTATAGGAACCGGCTGATGGGCGAAACAGCGGCAGATCGAGCGGGAAAAACCATATCA GATGCCTCCGGAAAGCAGCGGCCCAGCATTGCCGCGGGTTACCGGGCGTCCTCCGGCAGTACAGATATGCACCCCGTGGCAACCGGTCGCAGGCGGCGCG AATTCGCCGTCGTCGGCCATCTGATGTGTTTTTTTCGGCGGAATCTGCCGCTGTTTCGCTGTCTGTACGCGGGCGATAGTGGGTGCCAGTGAACACCGGC CCATCCTGTCGCCAGAAACAGGGGCGCAGCCGGTCCCCGTTTCTTCGCCACCCACCCTGCCCGTCATCGGTGGAGAAACCCTGTCGATGAGGGCTTTGCG
|
|
DNA Sequence for Gene |
>NQ74_RS18875
ATGTACCAGTACGATGAATACGACCAGGCGCTGGTGAGCGAGCGGGTGGCGCAGTTCCGCGACCAGATCGCCCGCCGCCTCGACGGCGAACTGAGCGAGG AGGAGTTCCTCCCGCTGCGCCTGCAGAACGGCCTGTACCTGCAGAAGCACGCCTACATGCTGCGCGTGGCGATTCCCTACGGCACCCTGTCGGCGCCGCA ACTGCGCGCCTTGGCGCACGTCGCCCGGCACTACGACCGCGGCTACGGGCACTTCACCACGCGGCAGAACATCCAGTTCAACTGGATCGAACTGGAGCAG GTCGGCGATATCCTCGAACACCTCGCCGGCGCGCAGATGCACGCGATCCAGACCTCCGGCAACTGCGTGCGCAACATCACCACCGAAGCCTTCGCCGGGG TCGCCGCGGACGAATGGACCGACCCCCGGCCGCTGGCCGAGATCCTGCGCCAGTGGTCGACGGTGAACCCGGAGTTCCTGTTCCTCCCGCGCAAGTTCAA GATCGCCCTCAGTTCGGCGGTGGAAGACCGCGCCGCGGTGCAGATGCACGACATCGGCCTGTACCTTTACCGCCACCCCGACGCCGGCGAGTTGCGCCTG CGGGTCTTGGTCGGCGGTGGCCTGGGACGCACGCCGATGCTCGGCCAGGTGATCCGCGACGACCTGCCCTGGCAGCACCTGCTGTCCTACGTCGAGGCGA TCCTGCGGGTCTACAACCGCCACGGCCGGCGCGACAACAAGTACAAGGCGCGGATCAAGATCCTGGTCAAGGCGCTGGGCATCGAGGCTTTCGCCCGCGA GGTGGAGGAAGAGTGGCAGCACCTGCGCGACGGCCCGGCACAACTGACTGCCGAGGAGTGCCAGCGGGTCGCCGAGCGCTTCGTATTGCCGCGCTACCTG CCGCCGGCCGGCGGCGAGCTGGCCTACGGCAGCGCCCGTGCGGCCGATCCGGCCTTCGCCCGCTGGGCCTCGCGCAACGTCCAGGCGCACAAGGTGCCGG GCTACGCCTCGGTGGTGCTGTCGACCAAGCCCGGCGCCAGCGCGCCGCCGGGCGACGTCACCGCGGAGCAGATGGAACGCGTCGCCGACTGGGCCGAGCG CTACGGTTTCGGCGAGATCCGTGTGGCCCACGAACAGAACCTGGTGCTCCCCGACGTGCGCCTGGAGAACCTCCACGCGCTGTGGCGCGAGGCCTGCGCA GCCGGCCTCGGCACGCCTAACCAGGGCCTGCTCAGCGACATCATCGCCTGTCCCGGCGGCGACTACTGCGCGCTGGCCAACGCCAAGTCGATCCCCATCG CCCAGGGCATCCAGCAGCGCTTCGAGGACCTCGACCACCTGCACGACATCGGCGAGCTGAGCCTGAACATCTCCGGCTGCATGAACGCCTGCGGCCACCA CCACATCGGCAACATCGGCATCCTCGGCGTCGACAAGAACGGCAGCGAGTGGTACCAGGTCACCCTCGGCGGCGCCCAGGGCAAGGACAGCGCGCTGGGC AAGGTGATCGGGCCATCGTTCAGCGCCGCCGAGGTGCCGGCGGTGATCGAACGGATCGTCGAAACCTTCACCGACCTGCGGGTCGGCCCGGAACGTTTCA TCGACACCTTCAACCGGGTCGGCCTGGAGCCGTTCAAGGCCCGGGTCTACGCCAGGATGGAGGAACCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACAACCTGATCCGTTTGCGCGATGGCGTCGCCGAGGTCTGCCGCGACGATCCCTGGCAACTCCTGCGCGAGTTGCCCGACGCGCTGCCGCCGGGGCCGTT GCTGCTGCCTTTGGCGGCCTGGCTGGAGCGCCGCGGCGAGGCCGGAGCCGCCGCGCCCTGGCTGGCGCCGGACGATGAGGTGGAGGCCTTGCTGCCGCAC TTCGCCGAGCTGCCGCTGATCGCCGTCGACTTCCCCAGCTTCCGCGACGGCCGTGGCTACAGCCTGGCCTACCTGCTGCGCGTGCGCCTGGGCTGGAGCG GCGAGTTGCGCGCAGTGGGTGACGTGTTGCGCGACCAGCTCAGCCATATGCGCCAGTGCGGCTTCGATGCCTTCGCGGTGCGCGAGGACAAGAACGTCGA GGATGCGCTCAAGGGGCTGGCGGGCTTGAGCGTGCTCTACGGCCGCTCGGCGATCGAGCCGCGACCGTTGTTCCGCCGTCGCTAGGCTTATGTCCCGGAC
|
|
Amino Acid Sequence |
>sulfite or nitrite reductase
MYQYDEYDQALVSERVAQFRDQIARRLDGELSEEEFLPLRLQNGLYLQKHAYMLRVAIPYGTLSAPQLRALAHVARHYDRGYGHFTTRQNIQFNWIELEQ VGDILEHLAGAQMHAIQTSGNCVRNITTEAFAGVAADEWTDPRPLAEILRQWSTVNPEFLFLPRKFKIALSSAVEDRAAVQMHDIGLYLYRHPDAGELRL RVLVGGGLGRTPMLGQVIRDDLPWQHLLSYVEAILRVYNRHGRRDNKYKARIKILVKALGIEAFAREVEEEWQHLRDGPAQLTAEECQRVAERFVLPRYL PPAGGELAYGSARAADPAFARWASRNVQAHKVPGYASVVLSTKPGASAPPGDVTAEQMERVADWAERYGFGEIRVAHEQNLVLPDVRLENLHALWREACA AGLGTPNQGLLSDIIACPGGDYCALANAKSIPIAQGIQQRFEDLDHLHDIGELSLNISGCMNACGHHHIGNIGILGVDKNGSEWYQVTLGGAQGKDSALG KVIGPSFSAAEVPAVIERIVETFTDLRVGPERFIDTFNRVGLEPFKARVYARMEEPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|