Strain | Pseudomonas aeruginosa strain AZPAE14509 AZPAE14509_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACCGCCTGAAGCCATTCAAGCTCTGCTCGCCGAAAGCCCTGGCGCTGCGCAGCAAGGTCTGGACCAAGCTTAAGAAATGATCGACACGGCGCTGGCGGCC AGCTCGCGCCAGCGCTGGCCGGCCAGCCAGCTTGGCCATTTCGATCCCTTTTTGACCGTCTACAGGGTTCTCCCCGGCGAAACCGGATTGCTAGAGTCGA ACCGCGCCCTCCTCGAGGGGTCGCCCGGAGCCGCGGAAACGGCGCCGGCAGAGCCCAAGGGAACCTCGCGACCGCGAGCTAGAAATCCAACAAGAACGCT TCCTGAGAACGCCATGAACACTATCGACGCCCCAACGCCCGTGCCCGCACACGCCGCGCGCCCTCTCGTCACTGCCATTTCCACCGACCCGGCGGAAACC CCAGCGGTTTTCCACTAGCCCGTCCATTCACCCGGAGCAGGAAAGGTCCGCCCACGCGGCCGCCTGCGGGATCGATACGGCATTTCGCGAGGAGCGGAAC
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DNA Sequence for Gene |
>NQ74_RS11000
ATGGCCAGCCAACGCAACAACGGCATCCTCATCGGCGGCAAGCGCCCCGAGTACGTCCACAGCGCCCAGGGCACCGGCCTGCGGCGCATCCTCGGGCTCC CCGCCCTGGTCTTCTTCGGGCTGGTCTACATGGTTCCGCTGACCATGTTCACCACCTACGGGGTAGTCACCGAGATCACCGGCGGTCGTACCGCCAGCGC CTACCTGATCACCCTGGCGGCGATGCTCTTCACCGCCTTTTCCTACAGCTTCATGGTGAAGAAATATCCCATCGCCGGCTCGGCCTATTCCTATACCAGC CTCAGCTTCGGCCCCTGCGTCGGCTTCCTCGCCGGCTGGTCGCTGCTGCTCGACTACCTGTTCCTGCCGATGATCAACTACCTGCTCATCGGCCTGTTCC TCAACATCGCCTTCCCGATGGTGCCGGCCTGGGTCTTCGTGCTCGCGGCGATCGGCCTGGTCACCGTGCTCAACGTGATCGGCATCAGCTCGGTGGCCGG CATGAGCAACGTGATCGTCGGCGCCCAGTTCGTCTTCGCCGTGGTGTTCGTCGCCATGGCGGTCAAGCACCTGGCCGGCATCCCCTCGCTGGACCTGAGC CTGCCCTTCGTCGGCGACGGCAGCCAGCCGGGCTTCGCCCCGTTGATGGCCGGCGCGGCGGTGCTGTGCCTGTCGTTTCTCGGCTTCGACGCGGTCTCGA CCCTGGCCGAGGAAACCCGCGACCCGCAACGCGACATCCCGCGCGCCATCGTCATCACCACGGTCGGCGCCGGCCTGCTGTTCACCGTGCTGGCGGTCTT CAGCCAACTGGTGTTCCCCGGCAGCGTATTCCAGGACGCCGAGTCGGCGGCCAACGAAGTGATGCTGGCGGCCGGCGGCAAGTTCCTCGCCAGCTTCTTC ACCGCCGCCTACGTCGCCGGCGCCGCCGGCTCGGCGCTGGCCTCGCAGGCCTCGGTGTCGCGCATCCTCTACAGCATGGGCCGCGACGGCATCCTGCCGC GGCGCGTGTTCGGCAGCCTCTCGGAGCGCTTCAAGACGCCAGTGATCGCGATCCTGGTGGTCTCGGTGATTTCCTTGCTGGCGGTGGTCATCGACCTCAC CACCCTGGCCTCGATGATCAGCTTCGGCGCGCTGGTGGCGTTCTCCGCGGTGAACCTGGCGGTGATCCGCAGCTACCTGCTGCTCGACGGCCGCCGCGCC CCGCGCGACCTGCTGCGCTACGGGCTGGTGCCGGCCATCGGCCTGGGCCTGACCCTGTGGCTGTGGACCAGCCTCTCGGCGCTGACCCTGGTGATCGGCC TGACCTGGTTCGCCGCCGGCCTCGCCTACCTGGCGTTGCATACCGGCGGTTTCCGCCGCAAGGCGCCGACCGTGACCTTCTCCGAACAGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGGGAGCCCGACATGCTGACCATCTACAGCGACGACCATCGCCTGCACCACGGCCGGCACGAACTGATCGGCGGCCAGTTCACCCCCTGCTTCGAAA AACCCAGCCGCGCCGACATGGTCCTCGACCGCGTGAAGGCCGTCGGCCTTGGCGAAGTTCGCGCACCGCGCGACTTCGGCCTGGAACCGATCCGCCGGGT GCACAGCGAGGGTTTCGTGCGTTTCCTGCAGAACGCCTGGCAGGACTGGCTGGCCACCGGCCGCAGCCACGACATGCTGCCGATCGCCTGGCCGACCCGG CGCCTGCGGCAGACGGAGCCGGACAACATCGACGGTCGCCTCGGCTACTACTCCTTCGACGCCGGCGCGCCGATCACCGCCGGGACCTGGCAGGCGATCA CCAGTTCGGCCAACGTCGCCCTCAGCGGCCAGTCCGAACTCGCCAACGGCGCGCGCTCGGTATTTTCGCTCTGTCGCCCGCCGGGCCACCACGCCGCGGC
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Amino Acid Sequence |
>amino acid ABC transporter permease
MASQRNNGILIGGKRPEYVHSAQGTGLRRILGLPALVFFGLVYMVPLTMFTTYGVVTEITGGRTASAYLITLAAMLFTAFSYSFMVKKYPIAGSAYSYTS LSFGPCVGFLAGWSLLLDYLFLPMINYLLIGLFLNIAFPMVPAWVFVLAAIGLVTVLNVIGISSVAGMSNVIVGAQFVFAVVFVAMAVKHLAGIPSLDLS LPFVGDGSQPGFAPLMAGAAVLCLSFLGFDAVSTLAEETRDPQRDIPRAIVITTVGAGLLFTVLAVFSQLVFPGSVFQDAESAANEVMLAAGGKFLASFF TAAYVAGAAGSALASQASVSRILYSMGRDGILPRRVFGSLSERFKTPVIAILVVSVISLLAVVIDLTTLASMISFGALVAFSAVNLAVIRSYLLLDGRRA PRDLLRYGLVPAIGLGLTLWLWTSLSALTLVIGLTWFAAGLAYLALHTGGFRRKAPTVTFSEQN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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