Pseudomonas aeruginosa B136-33, G655_23275
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa B136-33, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAATCGCATAAGCGTTCAGTAAATTTCCGTAACACGGTAGACCGCTATATGTTGAAAATACCGATAATCGGAGGAATACTTTACAAATCAGCCGTGGCAC GTTACGCCCGTACACTTTCAACAACTTTCGCCGCAGGTGTTCCATTGGTGGAGGCACTAGACTCTGTCTCTGGAGCGACAGGAAACGTGGTATTCCGCAA CGCGGTAAGCAAGATCAAACAGGATGTATCCACAGGTATGCAATTGAACTTCTCCATGAGAACGACCAATGTATTCCCCAACATGGCAATCCAGATGACA GCCATCGGTGAGGAATCCGGTTCTCTGGACGACATGTTGGGCAAGGTGGCTGCGTTCTATGAGGAGGAAGTAGACAATGCCGTCGACAATCTGACAACTC TCATGGAACCTATGATCATGGCCGTTCTCGGCGTACTGGTCGGCGGCCTGATCATCGCTATGTATCTACCGATCTTCCAACTGGGTTCCGTTGTGTAAAG
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| DNA Sequence for Gene |
>G655_23275
ATGGAACTCCTCGACTACCTGGCCAGCCATCCGCTGGCCTTTGTCTTGTGCGCTATCCTCCTTGGCCTGCTGGTTGGCAGCTTCCTCAACGTCGTCGTGC ATCGCCTGCCGAAGATGATGGAGCGCAACTGGAAGGCCGAGGCCCGCGAAGCGCTCGGGCTGGAGCCGGAACCCAAGCAGGCGACCTACAACCTGGTGCT GCCGAATTCGGCGTGCCCGCGCTGCGGCCACGAGATCCGCCCCTGGGAAAACATCCCGCTGGCCAGCTACCTGGCGCTGGGCGGCAAGTGTTCGTCCTGC AAGGCCGCCATCGGCAAACGCTACCCCCTGGTGGAACTGGCCACCGCGCTGCTTTCCGGCTACGTCGCCTGGCATTTCGGCGTCACCTGGCAGGCAGGCG CGATGCTCCTGCTGACCTGGGGCCTGCTGGCGATGAGCCTGATCGATGCCGATCACCAACTGCTGCCGGACGTGCTGGTGCTGCCGCTGCTCTGGCTGGG CCTGATCGCCAACCATTTCGGCCTCTTCGCCAGCCTCGACGATGCGCTGTTCGGCGCGGTGTTCGGCTACCTGAGCCTGTGGTCGGTGTTCTGGCTGTTC AAGCTGGTGACCGGCAAGGAGGGCATGGGCTACGGCGACTTCAAGCTGCTGGCCATGCTCGGTGCCTGGGGCGGCTGGCATATCCTGCCGCTGACCATCC TGCTGTCGTCGCTGGTCGGGGCGATCCTCGGGGTGATCATGCTGCGCCTGCGCAACGCCGAAAGCGGCACGCCGATCCCCTTCGGTCCCTATCTGGCGAT TGCCGGGTGGATTGCTTTGCTCTGGGGTGATCAAATAACCCGGACCTATCTGCAATTCGCCGGATTCAAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCAACCCTGGATACTAGGCCTCACGGGCGGTATCGGCAGCGGCAAGAGCGCAGCCGCCGAGCATTTCATTTCCCTCGGCGTCCACCTGGTGGACGCCGA CCATGCCGCCCGCTGGGTGGTGGAGCCGGGGCGTCCGGCCCTGGCGAAGATCGTCGAACGCTTCGGCGACGGCATCCTCCTGCCCGATGGCCAGCTCGAC CGCGCCGCCTTGCGCGAGCGGATCTTCCAGGCGCCGGAGGAACGGCGCTGGCTGGAGCAATTGCTGCACCCGCTGATCGGCGCGGAGATCGTCCAGTACC TGGCCAGGGCCGAATCGCCCTATGCCATCCTGGTCTCGCCGCTGCTGGTGGAGTCCGGCCAGCGCCAGATGACCCAGCGCGTGCTGGTGGTGGATACCCC GGAACATCTGCAACTACAGCGCACCATGCTTCGCGACAAGGTCTCCGAGGAGCAGGTGCGCTCGATCCTCCAGGCCCAGGCCCGGCGCGACGAGCGCTTG
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| Amino Acid Sequence |
>type 4 prepilin peptidase PilD
MELLDYLASHPLAFVLCAILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENIPLASYLALGGKCSSC KAAIGKRYPLVELATALLSGYVAWHFGVTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIANHFGLFASLDDALFGAVFGYLSLWSVFWLF KLVTGKEGMGYGDFKLLAMLGAWGGWHILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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