Strain | Pseudomonas aeruginosa strain AZPAE14526 AZPAE14526_contig_4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCACGCGCAGGCACCACTCCTGCCGCTCGCTGGCCAGGAGATCGCCGCAGCGCTCCAGGCGCTCCAGGCGCAGGGGTGTTTCGGCGGCGACCAAAGGACT GCCCAGGGACGCGAAAAGGATGGCGAAAACGGCACGGCGCAGCGGCATGGACTCGGCTTCCGTAACGGGGACCTGTTGTTCCGACCACCTGGCGAAACGC TTCGTTCAGGTTGAAGGCGAGCCCCCGGCCACGCCAAGGCGCAGGCTAGCCCGCCAGTTGTTCCAGCGCCTGCGCCTCGTCGAAGGCGGGGTGAACCGCT ACTCCCGGCAGATCGCCCGCATCTCCCTGCTGGCCATCCCGGCCGGGCTGCTGGCCCTGGGCTGCGGCCCGTACCTGATGCGGCAACGCTGAAAAATCCG CCGACTGTCCATTTCGCGACGATGACTGGCGCTTTTGCCGGCGCAGGCCGCCCGCGCCTGCCTTACCGTTCCCCGCTCTTTCAGACACGGGAGCAGGGCA
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DNA Sequence for Gene |
>NQ75_RS07425
ATGCCGCTTGCCAGTCATCTGCGTTGCGTGGCGCTGGCGCTGGGGATATCCACGGCGCTGGGCTGCGCGAACCGCAACCAACCCGCGCCACGCGCGGAAA GCCTCGACCCTGGCCTGTCGAGGGTGGCGGGAACCCGCGGCGACGCGCTGCCCGCCCAGTGGTGGACGCTCTACCAGGACCCTGGGCTGAACCACCTGGT GGCCGCCGCGCTGCGCCACAACCGCGACCTGGCCGCAGCCGATGCCCATGCCCGCGCGCTCCTCGGCCATCTGCGCGGCGCACAGGGCGAACGCTGGCCA CGGACCGAGGTCGGCTATGGCTACCAGTATGGGCGCGACGGCGACGACCAGACCCTCGCCGAAGCCACCGACGAGGAGCTGCGCAGCCAGTGGAAACACA CCGCCCGCCTCGACCTGTCCTACCAGTTGGACCTGTGGGGCGAAGTCCGCGCCCGCATCGCCGCGGCGAAGGCGGATGCCGAAGCGGCGCAAGCGGCGCG CGACCTGCTCAGGGTCAGCGTGGCCAGCCAGACCACCCTCGCCTACGTCCGCGCCTGCGCCCTGGCGCGACGGGCAGAGGTACAACGCCGATCGGTCGGT CTGCTCGACGCGAGCCTGGCGCTGAGCGAACGCCAGCTCGCCGCCGGCCTTTCCAGCGAGCTGCAGCGACGCCGGCTGCTGGCCTTGCGCGAGCGGACCC GCGCCGCGCTGCCGATGCTCGAGGCGCGGCGGCGCGCGGCACTCTACGAACTGGCGCTGCTCAGCGGGCGCTCGCCGCGCCAGTTGGACGCTCCTGCCGC GACCTGCGCCGGCATACCGCAACTGCGCCGTGCCCTGCCCACCGGCGACGGCTGGAGCCTGCTGGCGCGCCGCCCGGACGTCCGCGCGGCCGAGCGCCGG CTCGCCGCCGCCGACGCCCGGCGCGCGCTGGCCGAAGCCGAGCTGTACCCGCGCATCAGCTTCGCCGTCGGCGCCGAAACCTCCGCAGTGACCCTCGCCG GCCTCGGCGGCAGCGGCGCGCTGGCCTACGCGGCCGGCCCGCTGCTGAGCTGGCGCTTCCCCAACCGGGAAAGCGCGCGAGGCCGCCTGGACAGCGCAGC GGCAGAGCGCGACGCCGCCCTGGCGCGCTTCGACGGAGCGGTGCTCGGCGCCCTGCGCGAGGTCGAGCGTGCCCTGGCGCTGTATGCCGGCGAGCGCCAG CGGCGTGCCGACCTCCAGCGTGCCCTCGACGAGCAGCGCCACGCCTACCGGTTGGCGCGCAGCAACTATCGCGCCGGCGCCCTCGATGCCCTCGAGCTGC TCGACAGCCAACGCAGCCTGGTCGCCGACCGGGCGCGCCTGGTCGACGCCGAGATGCGCGTCGCCGAGCGCCAGGTCGAACTGTTCCGGGCTCTCGGCGG CGGCTGGCAAGCCGCTCCCAGCCCCTCCCACCAGGAAAACGGACAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCAGGCAATCAGGGAACCCATCGAACACACCACTGGCGAAACCATGCCAGCAGCCACGCGCCGGCGCCGAACCTGGCTGCTGGGCGGCCTCGCCGGCGC CATCGCGCTCGCCGCCCTGCTGGCCTGGTGGTGGAGCAGCGGACGCTTCCTGGAGGGCACCGACGATGCCTATGTACGCGCCGACTGGGTGGCGGTCAGC GCGCAGGTCTCCGGCTACGTCGCCGAGGTGCTGGTGGCCGACGACGCCGACGTCCAGGCCGGCGACCTGCTGCTGCGCCTGGACCCGCGCGACTTCCGCC AGCGCCTGCGCGCCGCCGAGGCCCGCGAAGCGGCGGCGCAGGCGGCGCTGGAAGCCCAGCGCGCGAAGCTGGAGACCCTCGATCGGCAACTGCTGGAGCA GGCGCAGACGATCAGCCGCGCCCGCGCCGATGGCGAAGCGGCGCGAGCCGAATGGCGCCGCGCCGAGACCGACTGGCGACGCTACCGGCAATTGGCCGAC
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Amino Acid Sequence |
>multidrug efflux pump outer membrane protein
MPLASHLRCVALALGISTALGCANRNQPAPRAESLDPGLSRVAGTRGDALPAQWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWP RTEVGYGYQYGRDGDDQTLAEATDEELRSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRVSVASQTTLAYVRACALARRAEVQRRSVG LLDASLALSERQLAAGLSSELQRRRLLALRERTRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGWSLLARRPDVRAAERR LAAADARRALAEAELYPRISFAVGAETSAVTLAGLGGSGALAYAAGPLLSWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGERQ RRADLQRALDEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQVELFRALGGGWQAAPSPSHQENGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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