Pseudomonas aeruginosa B136-33, G655_21375 (prpB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa B136-33, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGGTGGTGTCGCTGAGCCACGCCGAGCTGATCGAACTCTACGAGATCCGCGAGTCCCTGGAAGGCATGGCCTGCCGACTGGCCGCCGAGCGCATGAGC CAGGCCGAGATCGACGAACTGCGCCGGGTGCTCGACACCCACGAGCGCGACGAGGCGTTCCAGGCCGGGCGCGGCTATTACCAGCAGGAAGGCGACTACG ACTTCCACTACCGGATCATCCAGGGCAGCGGCAACGCCACCCTCACCCGCATGCTCTGCGGCGAGCTCTACCAACTGGTGCGGATGTACCGCATCCAGTA CTCGACCACACCGAACCGGCCGCGCCAGGCCTTCGCCGAACACCACCGCATTCTCGACGCCATCGCCGACCGTGACGGCGAACTGGCCGAGCTGCTGATG CGCCGCCACATCAGTGCGTCGCGCCGCAATATCGAGCGCCAGTTGGAACCCCAGCCGGCGAAGCTCGCCTCCGCTTCCTCCACCGTCTAAGAGGTCCGTG
|
|
| DNA Sequence for Gene |
>G655_21375
|prpB
ATGAGCCAGACGTCCCTTACCCCCGGCCAGCGCTTCCGCGAAGCCGTGGCCACCGAGCACCCGCTGCAGGTGGTCGGCACCATCAACGCCAACCACGCCC TGCTGGCCAAGCGCGCCGGCTTCAAGGCCATCTACCTGTCCGGCGGCGGCGTCGCTGCCGGTTCCCTGGGCCTGCCGGACCTGGGCATCAGCGGCCTCGA CGACGTGCTCACCGACGTGCGCCGGATCACCGACGTCTGCGACCTGCCGCTGCTGGTGGACGTCGACACCGGCTTCGGCTCCTCGGCGTTCAACGTCGCC CGCACGGTGAAGTCGATGATCAAGTTCGGCGCCGCCGCGATGCATATCGAGGACCAGGTCGGCGCCAAGCGCTGCGGCCATCGGCCGAACAAGGAGATCG TCTCGCAGCAGGAGATGGTCGACCGCATCAAGGCCGCCGTCGATGCCCGCAACGACGACTCCTTCGTGATCATGGCGCGCACCGACGCGCTGGCCGTGGA AGGCCTGCAGGCCGCCATCGACCGCGCCTGCGCCTGCGTCGAGGCCGGCGCCGACATGATCTTCCCGGAAGCCATGACCGAACTGGCCATGTACAAGGAG TTCGCCGCCGCGGTGAAGGTGCCGGTGCTGGCCAACATCACCGAGTTCGGCGCCACCCCGCTGTTCACCACCGACGAACTGGCCTCCGCCGACGTGTCCC TGGTGCTCTACCCGCTGTCGGCCTTCCGCGCCATGAACAAGGCGGCGGAGAACGTCTACACCGCGATCCGTCGCGACGGCACCCAGAAGAACGTGATCGA TACCATGCAAACCCGCATGGAGCTGTACGATCGCATCGATTACCACAGCTTCGAGCAGAAGCTCGACGCGCTCTTCGCGCAGAAGAAGAACGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCATCGAGCCCGGCGTGCGCCTGAGCGCCGGTCCGCGAACCCCGTGAAACCGAGTTGCAGCATCCAGAAAAAATTCAAGAAAGGAGAGAGCAATGGCTGA AGCAAAAGTACTGAGTGGCGCCGGCCTGCGTGGCCAGGTGGCCGGCCAGACAGCCCTGTCCACCGTCGGCCAGGAAGGCGCCGGCCTGACCTACCGTGGC TACGACGTCCGCGACCTGGCGGCGGCGGCGATCTTCGAGGAGGTCGCCTACCTGCTGCTCTACGGCGAACTGCCGAACAAGCAACAGCTCGACGCCTACC TGAAGAAGCTCCAGGGCCAGCGCGACCTGCCGCAGGCGCTGAAGGAAGTTCTCGAACGGATTCCCAAGGACGCCCACCCGATGGACGTGATGCGCACCGG CGCCTCGGTCCTCGGCACCCTGGAACCGGAGCTGAGCTTCGACCAGCAGCGCGACGTCGCCGACCGCCTGCTCGCCGCCTTCCCGGCGATCATGACCTAC
|
|
| Amino Acid Sequence |
>2-methylisocitrate lyase
MSQTSLTPGQRFREAVATEHPLQVVGTINANHALLAKRAGFKAIYLSGGGVAAGSLGLPDLGISGLDDVLTDVRRITDVCDLPLLVDVDTGFGSSAFNVA RTVKSMIKFGAAAMHIEDQVGAKRCGHRPNKEIVSQQEMVDRIKAAVDARNDDSFVIMARTDALAVEGLQAAIDRACACVEAGADMIFPEAMTELAMYKE FAAAVKVPVLANITEFGATPLFTTDELASADVSLVLYPLSAFRAMNKAAENVYTAIRRDGTQKNVIDTMQTRMELYDRIDYHSFEQKLDALFAQKKNA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|