Strain | Pseudomonas aeruginosa strain AZPAE14526 AZPAE14526_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTTTTCGCACCGGACGCCGCTTTCCGGTGCCCGCCGCAGCGCAACCAGGCCGGCCCGGCGCTTTCGCCAAGCCGGAAGGGCGAACCGGAAGACAGTGCAA TCCGTCGCTTCATCGGTACAAGGAGTCATGATGCGTCCATCCGCTGCCCATTGCCTGCTGCTGAGCCTGGGAGCTTCCCTGGCCCTGGCCGAGGAACCCG CGCCGGCACCGATTCCAGCCGCGCAACCTTCCATTACGCAGGCTACCGCCGAACTGGAGCGCCGCCTGGTGGAAACGGAACGCCAGCGCGACGAACTGGT CAGTCGTATGCGCCAGGAGAACCGCCAGTTGCGCGAGCAGCTGCAGGCGGCCCAGGCGCAGCGGCAACCGCCGCTGCTCACGGAAGAGCAGACCTGGTAT GTCGCCGGCGCCGCCACGGCCCTGCTCGCGTTCGTCCTCGGTGCCCTGAGCCGCGGCCGCCGGCGACAGCGACGCGAATGGATCAATTGAGCGACACTCG
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DNA Sequence for Gene |
>NQ75_RS24100
ATGAGCGAACTGCTGTTGATCGACGATGACCGGGAGCTCTGCGAGCTGCTCGGTACCTGGCTGGTCCAGGAAGGTTTCTCCGTGCGTGCCAGCCACGACG GCGCCCAGGCCCGTCGCGCCCTCGCCGAGCAGACACCGGATGCCGTGGTGCTCGACGTGATGCTGCCGGACGGTAGCGGCCTGGAACTGCTCAAGCAACT GCGCGGCGACCATCCCGACCTGCCGGTGCTGATGCTGTCCGCCCGCGGCGAGCCGCTGGACCGCATCCTCGGTCTGGAACTGGGCGCCGACGACTACCTG GCCAAGCCCTGCGACCCGCGCGAACTCACCGCACGGCTGCGCGCCGTGCTGCGGCGAACCCACCCGGCGCAACCCAGCGCGCAGATGCAACTGGGCGACC TGTCGCTGAACCTGACGCGCGGCGTGGCGCAGATCGACGGCCAGGAGATCAGCCTGACCCTTTCCGAAAGCCGCATCCTCGAAGCGCTCCTGCGCCAGCC CGGCGAGCCGCTGGACAAGCAGGCCCTGGCGCAACTGGCGCTGGGCCGCAAGCTGACCCTCTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC AAGAAGCTCGGCAGCCACCCCGACGGCAGCCCGCGCATCCTCGCCCTGCGCGGCCGCGGCTACTACTACAGCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGGTTTCGTCAGCCCGCCGACACAAGGTCTTTACCCAAGCTTTACCCAGGGCTGACCGCGCTTGACCTTGACCTCCCTAGACTGGGCTCATCCGGTAA ATGGCCGGACCCAGAAAGGAGAAACACCATGCGCAAGACGCTAACCGCCCTGTTCATCGCCGCCGCCCTGCCGACCTTCGCCATGGCCGCGCCCGCCGCC AACGACCTGCCACCCCCGCCGATGGAAGGCGGCCACATGATGGGCCAGCACGGTCCCCGGCATGGCGGCCCGATGAAGGAACTGGACCTGACCCGCGAAC AGCGCCAGCAGATGGGCAAACTGATGGGCGAACAAATGAAGGCCCGCCACGAGATCACCCAGCGCTACCTGGCCAAGCTGCCGGCGGCCGAGCAGAAGGC CCTGAAGGACGAACTCAAGGCCAGCCACGAGAAGACCCAGAAGGACATCCGCGCCCTGCTCACCCCCGAGCAGCAGAAGAAGTTCGACGAACTGCAGAAG
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Amino Acid Sequence |
>chemotaxis protein CheY
MSELLLIDDDRELCELLGTWLVQEGFSVRASHDGAQARRALAEQTPDAVVLDVMLPDGSGLELLKQLRGDHPDLPVLMLSARGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRTHPAQPSAQMQLGDLSLNLTRGVAQIDGQEISLTLSESRILEALLRQPGEPLDKQALAQLALGRKLTLYDRSLDMHVSNLR KKLGSHPDGSPRILALRGRGYYYSH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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