Strain | Pseudomonas aeruginosa strain AZPAE14526 AZPAE14526_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCCGAAGAACAGGTTCGGCTCGCCGAGCTTCATGAAGTCGTCCTTCGACTGCCAGTCCGGCTGGGCGATGATGCCGACGCGGAACCCCTGGGCCTCCAG CAGGCGGCCGATGATGGCCATGCCGAAGGACGGGTGGTCGACGTAGGCATCGCCGGTGACGATGATGATGTCGCAGGAGTCCCAGCCGAGCTGATCCATC TCTTCCCTACTCATAGGCAGGAAGGGCGCCGGACCGAAACACTCGGCCCAGTACTTGGGATAGTCGAACAGCGGCTTGGCGGCTTGCATCACGGGCACCA GGGGGTATCTCTAGGAATGGGGGGTCGCGTAAACGCGGGCGCGGAATATAGCACAAAAAATGAGCAATTCCGACGTTTTCACTGGGTATTGCCTATCGTC GGCTGGCCTCGCAAACCGCCATCATTTCGCCACCTTCTTTCTATACTCCATCCATCGTCATCTCACCCGGCCTCCACCAGAGGCCCCCGGGAGATTCATC
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DNA Sequence for Gene |
>NQ75_RS00800
GTGCGCCATCCTCTTGCCCAGTTCGCGGTCGTCTTCCTGCTATTGGCCAGCGCCGCGTCGAACGCAGCGCCGGGGCTTCCTACGGGCCCGGCCAGCGGCG CCTGGTTGAACGGCTCGCTGGACCTGCTCGAAGACCCCGATGGCAACCTGGCGGTGGAGGACCTCGAACAAGCGGAGCAGGCCGGCCGCTTCGTCGCCGC CGCCGGCCGCACCAGCGTCGGCCTCAGCCGCAGCGCCTGGTGGCTGCGCCTCGACCTGCCGAGACGCGAGGCGGTATCCGGCGGCTGGTGGCTGGAAGTC GCCAGCGCCAGCCTGCACGACCTGCGCCTGTATCTCCCCGACGAGCGCGGCGGGTTCCGTGAACATCGCAGCGGCGAAGCGGTGCCCTTCGCCGAGGGCC GCGACCACGCCTACCGTCATCCGCTGTTCCGGATCCCTCCCGGCGATGGGCCGTTGCGCGTCTACCTGCGCAGCTACGATCCCGGCGGCAACGCCTTTCC GCTGAGGCTCTGGAGCCACGACGAACTGCTGGAATACCGCAGCCAGGGCAACCTGCTGTTCGGCATGGCCTACGGGCTGATCCTCGCCCTGCTGCTGTAC AACCTGTTCCTCTTCACCAGCCTGCGCGATCGCGCCTATTTCTGGTACGTGCTGACCGCTGCCAGCGCGCTGGTGCTGACCCTGAGCATCAGCGGCCATG GTTTCGAGTATTTCTGGCCCGAGCGGGCGGTGCCCTGGTGGCTTGACCGCCTGGCGCTGCTGGCGATCTGGGGCATCTGCGTGATCCGCTTCAGCCAGAA CCTGCTGCAAAGCCGGCAGCACGCACGCTGGGCCCATCACCTGCTGAACGCCTGTTGCCTGCTGTTCCTTGCCTGCCTGGCGTTCAACGCCGCCGGCTGG CGCTGGCAGGCGGCCGGCGTGCTGGCGCTGACCCTGCTGGCCAACCTGCCGATCGCCATCGGCCTGGCAGTGCAGCGCTGGCGCCAGGGTTCGGCCACGG CGCGCCTGTACCTGGTCGGCTTCGGCCTGGTGCTCGGCAGCGTCAGCCTTGGCGTGATGCGCGCCACCGCGCTGGTCCAGCCGACCTCGGCCAACGCCAT GGTCTTCCCGCTGGCGCTGACCCTGGAGGCCCTGCTGTTCTCCCTGGCGCTCGCCTCGCGCATCCAGGATCTGAAGCAGGAAAGGGCCCTGGCCCTGGAC CAGGCCGACCAGGAAAAGAACGCGCGCCTGGCCCTGCTGCACAGCGCCCAGCGCGACCTGGCACGCGCCGTGGAAGTCCGTACCAACGAGTTGAGCGAGG CCAATCGCCAGTTGCAGATGCGCGAAGCGCAACTGCAGTACGCCGCCCATCACGACCCGCTGACCGGGCTTGGCAACCGCAGGCACCTGATGGAGTTCGC CGAAAGCGCCCTGGACGACGCGCGCCGCCACGGCAACAGCATGGCGCTGCTGCTGATCGACCTGGATCACTTCAAGCCGATCAACGATACCCATGGCCAC GATGCCGGCGACTTCGTCCTGCAGAACGTGGCCCAGCGGCTGCGCCATTGCGTGCGCACCGAGGATTGCGTGGCGCGCCTCGGCGGCGACGAATTCGCCG TGCTGGTCGGCGGGTCGAATGCCGAGCAGCATGCCCGCGACATCGCCGAACGCCTGCTGCGAGAACTGGCGAAACCGGTGGAGTTCGCCAAGCAGTGGCT GGTGATCACACCGAGCATCGGCGTCGCCCTGTTTCCCGGCGACGCCCTGCAGTTCGGCAAACTCTACAAGGCCGCCGACCAGGCGCTGTACCGGGTCAAG GGCGCCGGGCGCGCCGGCTATGCGATGGCTGCCGACGATGAACGCGAGACCGCGCCGGCGCTCCCCTGGCCGACCGCCCTGGCACCGGAGCGTATCTCCT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATCAGTGGCTGTAGCGTCGCGGAACCCGAGCCGTGACCTTGCTCAGAAGCTCGTAGCCAAGGGTGCCGCAGGCACGGGCGACCTCGTCCACCGACAACCC GGCGCCCCACAACTCCACCGGGTCGCCAACGCGAGCCTCCGGCAGGTCGGAGAGGTCGACCGCCAGCATGTCCATCGAGACCCGCCCGGCCAGGGTCGCG CGGCGTCCCCCGACCAGTACCGGAGTCCCGGCTGGCGCGGTACGCGGATAGCCGTCGGCGTAGCCGCAACTGACCGTGCCGATCCGCGCCGGCCGCTCGG CGATCCAGGTGGCGCCGTAGCCGACGCTCTCACCCACGGCCACCTCGCGCAGTGAAATCAACTGCGCGCCCAGGCTCATGGCCGGCTTCAGGCCCAGTTC GGCAGCACTGAGGTCGGCCAGCGGGGTCGACCCGTAGAGCATGATTCCCGGCCGCAGCCAGTCCATGTGGGCGGCCGGGATAGTCAGCACCGCCGCCGAA
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Amino Acid Sequence |
>DeoR family transcriptional regulator
MRHPLAQFAVVFLLLASAASNAAPGLPTGPASGAWLNGSLDLLEDPDGNLAVEDLEQAEQAGRFVAAAGRTSVGLSRSAWWLRLDLPRREAVSGGWWLEV ASASLHDLRLYLPDERGGFREHRSGEAVPFAEGRDHAYRHPLFRIPPGDGPLRVYLRSYDPGGNAFPLRLWSHDELLEYRSQGNLLFGMAYGLILALLLY NLFLFTSLRDRAYFWYVLTAASALVLTLSISGHGFEYFWPERAVPWWLDRLALLAIWGICVIRFSQNLLQSRQHARWAHHLLNACCLLFLACLAFNAAGW RWQAAGVLALTLLANLPIAIGLAVQRWRQGSATARLYLVGFGLVLGSVSLGVMRATALVQPTSANAMVFPLALTLEALLFSLALASRIQDLKQERALALD QADQEKNARLALLHSAQRDLARAVEVRTNELSEANRQLQMREAQLQYAAHHDPLTGLGNRRHLMEFAESALDDARRHGNSMALLLIDLDHFKPINDTHGH DAGDFVLQNVAQRLRHCVRTEDCVARLGGDEFAVLVGGSNAEQHARDIAERLLRELAKPVEFAKQWLVITPSIGVALFPGDALQFGKLYKAADQALYRVK GAGRAGYAMAADDERETAPALPWPTALAPERIS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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