Pseudomonas aeruginosa B136-33, G655_18925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005615 extracellular space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004222 metalloendopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005509 calcium ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001205
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008237 metallopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.390.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psg01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam NF035945 NCBIFAM: serralysin family metalloprotease - - 7 472 0.0
SUPERFAMILY SSF51120 beta-Roll IPR011049 Serralysin-like metalloprotease, C-terminal 249 471 4.19E-48
Pfam PF00353 RTX calcium-binding nonapeptide repeat (4 copies) IPR001343 RTX calcium-binding nonapeptide repeat 343 377 1.1E-9
Gene3D G3DSA:3.40.390.10 Collagenase (Catalytic Domain) IPR024079 Metallopeptidase, catalytic domain superfamily 20 252 0.0
FunFam G3DSA:2.150.10.10:FF:000001 Serralysin - - 247 469 1.2E-117
PRINTS PR00313 NodO calcium binding signature - - 332 343 3.7E-12
Pfam PF08548 Peptidase M10 serralysin C terminal IPR013858 Peptidase M10 serralysin, C-terminal 250 472 1.1E-81
PIRSF PIRSF001205 Serralysin IPR016294 Peptidase M10B 1 472 0.0
PRINTS PR00313 NodO calcium binding signature - - 362 370 3.7E-12
PRINTS PR00313 NodO calcium binding signature - - 371 380 3.7E-12
Gene3D G3DSA:2.150.10.10 - IPR011049 Serralysin-like metalloprotease, C-terminal 14 469 0.0
SUPERFAMILY SSF55486 Metalloproteases ("zincins"), catalytic domain - - 7 248 7.1E-71
PRINTS PR00313 NodO calcium binding signature - - 353 361 3.7E-12
Pfam PF13583 Metallo-peptidase family M12B Reprolysin-like - - 163 223 1.8E-5
CDD cd04277 ZnMc_serralysin_like IPR034033 Serralysin-like metallopeptidase domain 58 249 1.54519E-45
SMART SM00235 col_5 IPR006026 Peptidase, metallopeptidase 71 234 4.9E-29
FunFam G3DSA:3.40.390.10:FF:000046 Serralysin - - 20 252 5.6E-120

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.