Pseudomonas aeruginosa B136-33, G655_17160
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006636 | unsaturated fatty acid biosynthetic process |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1610
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
9286984 | |
| Molecular Function | GO:0008693 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00405
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006633 | fatty acid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00405
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00405
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psg00061 | Fatty acid biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psg01212 | Fatty acid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psg01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF07977 | FabA-like domain | IPR013114 | Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ | 28 | 157 | 3.5E-52 |
| SUPERFAMILY | SSF54637 | Thioesterase/thiol ester dehydrase-isomerase | IPR029069 | HotDog domain superfamily | 2 | 168 | 4.97E-58 |
| FunFam | G3DSA:3.10.129.10:FF:000003 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | - | - | 1 | 171 | 1.5E-102 |
| Gene3D | G3DSA:3.10.129.10 | Hotdog Thioesterase | - | - | 1 | 171 | 8.1E-68 |
| NCBIfam | TIGR01749 | JCVI: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA | IPR010083 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA | 3 | 171 | 1.6E-97 |
| PANTHER | PTHR30272 | 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE | IPR013114 | Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ | 28 | 159 | 2.2E-24 |
| Hamap | MF_00405 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. | IPR010083 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA | 1 | 171 | 51.64296 |
| CDD | cd01287 | FabA | IPR010083 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA | 26 | 165 | 2.36688E-67 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.