Pseudomonas aeruginosa B136-33, G655_16150 (clpP)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044010 single-species biofilm formation
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0044011 single-species biofilm formation on inanimate substrate
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Biological Process GO:0071236 cellular response to antibiotic
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1801
 ECO:0000249
sequence similarity evidence used in automatic assertion		 22123702
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07017
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07017
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004176 ATP-dependent peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd07017
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Chaperones & heat shock proteins Other B136-33 genes in this class
Cell wall / LPS / capsule Other B136-33 genes in this class
Antibiotic resistance and susceptibility Other B136-33 genes in this class
Motility & Attachment Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.90.226.10 - - - 12 212 1.0E-89
Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. IPR001907 ATP-dependent Clp protease proteolytic subunit 19 209 43.732155
NCBIfam TIGR00493 JCVI: ATP-dependent Clp endopeptidase proteolytic subunit ClpP IPR001907 ATP-dependent Clp protease proteolytic subunit 19 207 2.9E-104
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 127 146 2.0E-52
Pfam PF00574 Clp protease IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA 29 208 2.5E-88
FunFam G3DSA:3.90.226.10:FF:000001 ATP-dependent Clp protease proteolytic subunit - - 18 210 3.3E-103
PANTHER PTHR10381 ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA 18 209 1.0E-98
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 184 203 2.0E-52
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 35 50 2.0E-52
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 106 123 2.0E-52
CDD cd07017 S14_ClpP_2 IPR001907 ATP-dependent Clp protease proteolytic subunit 35 205 9.23311E-104
PRINTS PR00127 Clp protease catalytic subunit P signature IPR001907 ATP-dependent Clp protease proteolytic subunit 75 95 2.0E-52
SUPERFAMILY SSF52096 ClpP/crotonase IPR029045 ClpP/crotonase-like domain superfamily 27 210 6.84E-76

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.