Pseudomonas aeruginosa B136-33, G655_16140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0071977 bacterial-type flagellum-dependent swimming motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1803
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17259618
Biological Process GO:0071236 cellular response to antibiotic
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1803
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17259618
Biological Process GO:0044010 single-species biofilm formation
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1803
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17259618
Biological Process GO:0042493 response to drug
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1803
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17893152
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1803
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17259618
Biological Process GO:0043107 type IV pilus-dependent motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1803
 ECO:0000249
sequence similarity evidence used in automatic assertion		 17259618
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01973
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004176 ATP-dependent peptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01973
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043565 sequence-specific DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01973
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030163 protein catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10046
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01973
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01973
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other B136-33 genes in this class
Translation, post-translational modification, degradation Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00763 JCVI: endopeptidase La IPR004815 Lon protease, bacterial/eukaryotic-type 8 766 0.0
CDD cd19500 RecA-like_Lon - - 309 489 2.52236E-126
Gene3D G3DSA:1.20.58.1480 - - - 117 241 1.2E-42
Coils Coil Coil - - 233 253 -
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like IPR020568 Ribosomal protein uS5 domain 2-type superfamily 590 765 4.55E-58
PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature - - 352 371 2.5E-54
FunFam G3DSA:1.20.58.1480:FF:000001 Lon protease - - 116 241 1.7E-63
MobiDBLite mobidb-lite consensus disorder prediction - - 775 798 -
PANTHER PTHR10046 ATP DEPENDENT LON PROTEASE FAMILY MEMBER IPR027065 Lon protease 8 773 0.0
Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain IPR003111 Lon protease, N-terminal domain 6 197 3.5E-42
PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature - - 668 687 2.5E-54
FunFam G3DSA:3.40.50.300:FF:000021 Lon protease homolog - - 309 486 5.6E-92
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 348 484 1.0E-18
FunFam G3DSA:3.30.230.10:FF:000010 Lon protease - - 580 767 8.3E-108
PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature - - 590 606 2.5E-54
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 310 486 2.8E-64
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 309 581 6.88E-53
Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain IPR008269 Peptidase S16, Lon proteolytic domain 565 767 8.3E-98
Hamap MF_01973 Lon protease [lon]. IPR027543 Lon protease, bacterial 7 767 71.453232
PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature - - 698 717 2.5E-54
SMART SM00464 lon_5 IPR003111 Lon protease, N-terminal domain 6 198 5.2E-73
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 344 488 9.3E-13
Gene3D G3DSA:1.10.8.60 - - - 487 575 1.6E-34
FunFam G3DSA:1.20.5.5270:FF:000002 Lon protease homolog - - 248 297 1.3E-19
Gene3D G3DSA:1.20.5.5270 - - - 248 296 3.0E-20
FunFam G3DSA:2.30.130.40:FF:000001 Lon protease - - 1 114 2.5E-52
Gene3D G3DSA:3.30.230.10 - IPR014721 Small ribosomal subunit protein uS5 domain 2-type fold, subgroup 576 781 6.9E-78
Gene3D G3DSA:2.30.130.40 - IPR046336 Lon protease, N-terminal domain superfamily 2 114 2.2E-39
PIRSF PIRSF001174 Lon_proteas IPR004815 Lon protease, bacterial/eukaryotic-type 1 770 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 778 798 -
PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature - - 721 739 2.5E-54
SUPERFAMILY SSF88697 PUA domain-like IPR015947 PUA-like superfamily 6 197 4.72E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.