Pseudomonas aeruginosa AZPAE14538, NQ78_RS06575

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTGATGCTGAAAGTTTTGTACGGGTTGAAGAACTTTGAGGGCAAGTCGAAGTTCAAAACGTGGCTATATAGCATCACGTACAACGAGTGCATCACGCA GTACCGCAAGGAGCGCCGCAAGCGCCGATTGATGGATGCGCTCAGCCTCGACCCGCTGGAGGAGGCTTCCGAGGAGAAGTCGCCGAAGGTTGAGGAGCGG GGCGGATTGGATCGTTGGCTCGTCCATGTCAATCCGATAGATCGGGAGATTCTGGTTCTTCGCTTCGTCGCGGAACTGGAGTTTCAGGAGATAGCGGATA TCATGCACATGGGTCTGAGTGCGACGAAAATGCGCTACAAGCGGGCACTGGACCGCCTGCGCGAAAAGTTTTCAGATGCGACCGAAACATAGTTGGGTAA ATATTGTCTCTCTATGCGGGAAGTTCTGATAAACTTGCCACCCAAGTTGTGCGGCTGATTGTTGGACAACTAACTGACCATCAAGATGGGGATTTAACGG
DNA Sequence for Gene
>NQ78_RS06575
ATGAAACTGAAGAACACCTTAGGCGTTGTCATCGGCTCGCTGGTTGCCGCTTCGGCAATGAACGCCTTTGCCCAGGGCCAGAACTCGGTAGAGATCGAAG CCTTCGGCAAGCGCTACTTCACCGACAGCGTTCGCAACATGAAGAACGCGGACCTGTACGGCGGCTCGATCGGTTACTTCCTGACCGACGACGTCGAGCT GGCGCTGTCCTACGGTGAGTACCATGACGTTCGTGGCACCTACGAAACCGGCAACAAGAAGGTCCACGGCAACCTGACCTCTCTGGACGCCATCTACCAC TTCGGTACCCCGGGCGTAGGTCTGCGTCCGTACGTGTCGGCTGGTCTGGCTCACCAGAACATCACCAACATCAACAGCGACAGCCAAGGCCGTCAGCAGA TGACCATGGCCAACATCGGCGCTGGTCTGAAGTACTACTTCACCGAGAACTTCTTCGCCAAGGCCAGCCTCGACGGCCAGTACGGTCTGGAGAAGCGTGA CAACGGTCACCAGGGCGAGTGGATGGCTGGCCTGGGCGTCGGCTTCAACTTCGGTGGTTCGAAAGCCGCTCCGGCTCCGGAACCGGTTGCCGACGTTTGC TCCGACTCCGACAACGACGGCGTTTGCGACAACGTCGACAAGTGCCCGGATACCCCGGCTAACGTCACCGTTGACGCCAACGGCTGCCCGGCTGTCGCCG AAGTCGTACGCGTACAGCTGGACGTGAAGTTCGACTTCGACAAGTCCAAGGTCAAAGAGAACAGCTACGCTGACATCAAGAACCTGGCTGACTTCATGAA GCAGTACCCGTCCACTTCCACCACCGTTGAAGGTCACACCGACTCCGTCGGCACCGACGCTTACAACCAGAAGCTGTCCGAGCGTCGTGCCAACGCCGTT CGTGACGTACTGGTCAACGAGTACGGTGTAGAAGGTGGTCGCGTGAACGCTGTTGGTTACGGCGAGTCCCGCCCGGTTGCCGACAACGCCACCGCTGAAG GCCGCGCTATCAACCGTCGCGTTGAAGCCGAAGTAGAAGCTGAAGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCTGAGCCTCTAAGGAAAAACCCGGCCCAGGCCGGGTTTTTCTTTGCCTGGAAAAAGACCGCTCGTCAGGCGCTCAGGGAAATCGGTTGCGACACGA TGTCGCGGGTTACTTCGCCGATCACCAGGATCGCCGGGCTTTTTAAGGCGAAACGTCCGGCGTCCCGCAGTAGCTCGCCGAGGTTGCTGCGGCATTCGCG CTGGTTGCCCAGGGTGGCGTTCTCGATCATCGCCAGCGGCGTATCCTCGGCCATACCTCCAGCCAGCAGCCCGGCCTGGATCTCTGCGAGACGGGCGACG CCCATGTAGACCACCAGCGTGGTACCGCTGCGTGCCAGGGCTTCCCAGGCCAGCGGGCTGTCGTCCTGGGTATGCGCGGTCACCAGGGTCACGCCGCGGC TGATGCCGCGGTAGGTCAGCGGTATGCCGCAGGCAGTGGCGCCAGCCAGCCCGGCGGTGATGCCGTTCACTATCTCGCTGTCTATCCCGTGCCGGGCCAG
Amino Acid Sequence
>porin
MKLKNTLGVVIGSLVAASAMNAFAQGQNSVEIEAFGKRYFTDSVRNMKNADLYGGSIGYFLTDDVELALSYGEYHDVRGTYETGNKKVHGNLTSLDAIYH FGTPGVGLRPYVSAGLAHQNITNINSDSQGRQQMTMANIGAGLKYYFTENFFAKASLDGQYGLEKRDNGHQGEWMAGLGVGFNFGGSKAAPAPEPVADVC SDSDNDGVCDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVGTDAYNQKLSERRANAV RDVLVNEYGVEGGRVNAVGYGESRPVADNATAEGRAINRRVEAEVEAEAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site