Pseudomonas aeruginosa AZPAE14538, NQ78_RS24670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_23, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGTCGAGCGCGCCGACCTGGCCGTGTCGAAGCACCAGTTCGACATCGTCAGCACCAGGCTGCTGACCCAGTTCTCCAACAACATCCGCAACAACTTCG GCTTCCTCAACCGCGCCGACGAGAGCGGTATCGGCAAGCGCGACAAGCTGTTCGTCCAGGAAGGCCGCAAGGTGTTCAAGGATGTCTGCCCGATGGTCGC CGAGCTGATCGGCGAGCACCTGGCGGCCAATGAAATCCAGGTCGCCGAGGTCAAGCGCTTCTGGCTGCACCAGGCCAACCTGAACATGAACCTGCTGATC ACCCGCAAGCTGCTCGGCCGCGACGCTGAGGCGCACGAGGCGCCGGTGATCCTCGACTGCTACGCGAATACCAGTTCCGCCGGCTCGGTGATCGCCCTGC ACAAGCACCAGGACGACCTGCCCAGCGGCGCCATCGGGGTGCTCAGCTCGTTCGGCGCCGGTTACTCGATCGGTAGCGTGATCCTGCGTAAACACTGATC
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| DNA Sequence for Gene |
>NQ78_RS24670
GTGGCGGCGCCTACCGACGCCGAGCTGCTGCCGCGCCTGCTGGCCGGCGAGCAGCGAGCCTTCCGCGAGCTGGTTGGCGCCTACCAGGGCGCCATGCGGG CCGTGGCCTGGGCGATCATCGGCAGATCGCATACCGAGGAAGTGGTGCAGGACGCCTGGCTCGCGGCGGTTCGCGGGCTGGACGGGTTCCAGGGGCGTTC GAGCCTGAAGACCTGGCTGCTGACCATTACCGCCAATACCGCCAAGAGCCGCTTGCGCCAGGTTCGCCGGGAAGTTTTCCTCGACGACCTGCCGGGGCCC CATGGTACGGTGGATGACCAGCGCTTTGCCGCTGACGGTCACTGGAGCCAGCCGCCGCACGCCTGGCACGAGGATTCGCCGGAAGCCCTGCTCGCCGAGG GCGAACTGCGCGATTGCCTGGACAAGACCCTCAACGGTCTGTCCGAGCTGCAGCGCAGCGTGCTGACCCTGCGCGAACGCCAGGGCTTGGAGCTGGAGGA AATCCGTGATCTCCTGGATATCACGCTTTCCAATGTCCGGGTGCTGCTGCATCGCGCCCGCCTGAAGGTCTTCGCCACCCTGGAGCATTTCGAGGAGACC GGCCAATGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTGCAAGGAACTGGTCGCCCGGTCCAGCGACTTTCTCGATGGGCAACTGGACTTCCGCGGACAACTGGCGGTGCGCAGCCACCTGCTCATGTGCCGGCA TTGCCGGCGCTTCATCCGCCAGATGCGCCTGACCCAGGCGACCGTGCGCCATCTGCCGGAAGGGCAGGGGCCGGAACTCGACCGCCTGGCCGCGCATCTC TCCGAATTGCGCAAGGACGCCGCGCGGCGCTGAGCCGGGGTACCCTCGACACCAAGCCGCCGCCCGCGATTCGTGGGCGGCGGCTTTTTCGTTTCCGCTA TCCGGCGTGGGAGAACCGAACCCGGCCTGGCATGGGTGGCTCTCCCTTCCGCGTGACGAGGTCGAGGAGTGTGGCTGGGCTTGGCGGATATCGCTGCGCG ATATGCACCCTACGGAGGGGCGGCAATCCGTTTCGCTGGGCGAGCATCCGAAGTTGAGGAGAACGCCTGGGACCTGGCGAATATCGCCGACCGATATTTC
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| Amino Acid Sequence |
>RNA polymerase subunit sigma-24
MAAPTDAELLPRLLAGEQRAFRELVGAYQGAMRAVAWAIIGRSHTEEVVQDAWLAAVRGLDGFQGRSSLKTWLLTITANTAKSRLRQVRREVFLDDLPGP HGTVDDQRFAADGHWSQPPHAWHEDSPEALLAEGELRDCLDKTLNGLSELQRSVLTLRERQGLELEEIRDLLDITLSNVRVLLHRARLKVFATLEHFEET GQC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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