Strain | Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACCTGCTGAAGAAGATCAGCTTCCCGCGCATCTGCCTGCCGGTCATCGTACTGCTCAACGCCGGGGTCAATTTCGCCATCATCCTCGCCTTGTTCCTCG GCTTTCTTGCCTTCAGCGGGCGCCTGCCGGGCGCGGCATTGCTCGCGCTGGTGCCGCTGCTGGCGATCCAGGTGCTGTTCGCGGCGGGACTGGGGATGAT CCTCGGGGTGCTCAACGTGTTCTTCCGCGACGTCGGCCAGCTGTTCGGCATCTGCCTGCAGTTCTGGTTCTGGCTGACGCCGATCGTCTATCCGATCGGC ATCCTGCCCGAGGGTATCCGCTCGCTGATCGAACTCAATCCGATGACCGCGCTGATGCGCAGCTACCAGCAGCTGTTCCTCCACGGGCAATGGCCGGACT GGCCTTCATTGCTGCCGATCACCCTGCTGGCGCTGCTGCTGTGCGCGCTCGGCTTGCGTCTGTTCCGCCAGCGGGTCGGCGAAATGGTGGATGAACTCTG
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DNA Sequence for Gene |
>NQ78_RS22090
ATGGGACAGATACGCGTATCCGGACTCGGCAAGGCCTACAAGCAGTATCCCAATCGCTGGAGCCGGTTGTTCGAATGGCTGGTGCCTTTCAGCCCTCCGC GCCACCACCTGCACTGGATCCTGCGCGAGGTCGAGTTCACCATCGAGCCGGGCGAAGCGGTCGGCATCGTCGGGGTCAACGGCGCCGGCAAGAGCACCCT GCTGAAGATGATCGCCGGCACCACCCAGCCGACCTGCGGCGAGATCCGCGTGGCCGGCCGGGTCGCCGCGCTGCTCGAGCTGGGCATGGGCTTCCACCCG GACTTCACCGGCCGGCAGAACGTCTTCATGGCCGGGCAACTGCTGGGCATGCAGGTCGAGGAAATCCAGGCGCTGATGCCGGATATCGAGGCCTTCGCCG AAATCGGCGAGGCCATCGAGCAACCGGTGCGCACCTACTCCAGCGGCATGCAGATGCGCCTGGCGTTCAGCGTGGCGACTGCCCGGCGGCCGGACATCCT GATCGTCGACGAGGCCCTGTCGGTTGGCGATGCCTATTTCCAGCACAAGAGCTTCGAGCGCATCCGCAGTTTCCGCAAGGCCGGCACCACCCTGCTGATC GTTTCCCACGACCGCTCGGCGATCCAGTCCATCTGCGACTCCGCGATCCTCCTGGAGCAGGGACGGATGGCCATGCGCGGGCGGCCGGAAGAAGTGATGG ACTACTACAACGCCCTGCTCGCCGAGCGCGAGGGGCAGACCGTGCGCCAGGAAATGCTCGCCGACGGCCAGGTGCGGACGATTTCCGGCACCGGCGAGGC AGCGATCCTCGACGTACGGATGGTCGACCAGCGGCAGCGCGCGCTGGAGGTGGTCGAGGTAGGCCAGGCGGTGACGCTGGAAGTCGAGGTCGAGGTTCGC CAGGACATCGAGCGGCTGATCCTCGGCTTCATGATCAAGGACCGCCTCGGCCAGCCGATGTACGGGATCAATACCCACCGCCTGGACAAGGCCCTCACCG ACCTGAAGGCCGGCGAGCGCATCACCTACCGCTTCGCCTTCGACATGCGCCTGGGCAAGGGGCACTACTCGGTGGCGCTGAGCCTGTCGCGGCTGGACTC GCACCTGGACCGCAACTTCGAATGGCGCGACTACGGCCTGGTCTTCCATGTCATCAACAACCGCCAGGAAGACTTCGTCGGTTGCTCCTGGCTGGGCGCC GAAACCCATATCAGCCGCTCCGGCGAGGCGGCTCTGGACCCCACTTCCGCGGAGAGCACTCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCGTCTGTTGGTCGAATGCACCTATGTGTTCGAGCATCCCAAGGTCAATTCTGGTATTCAGCGGGTGGTGCGCAACGTCATCCGCGAGTTGCCGGAAGC CGACGAGACGGTGGAGTGCATCCCGGTGGCAATGCTCGACGGCACCCTGTATCAGGTCCACAGCCTGGCGCCGCTGGACCCGCGGCCGCATTCGCCGCTG GTACGCCTGCGCATCCTGGTGGAGCGAGCCGCCAACTACTTCTGGCTGGGCCAGCGCACCCTGGAAAAGCGCCGCCCGTTCCGTTCCTCGCCGTGGGCCC GGCGCCTTCTCTATGTAGCCTGCCGCCTGTTCGCCTTCGCCTTCCTCAGCATTCCGCTGCGCCTGCTCGACCGCATCCTCGGCAAGCAGCAGCCTGCACC CGTGCGCGCGACCCCGCTCGAACATCGGGCCGGCGACCAACTGGTCTTGCTGGACTCCTCCTGGCACGCCGATTTCTTCCCGCTGGCGGAACGCCTCAAG
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Amino Acid Sequence |
>sugar ABC transporter ATP-binding protein
MGQIRVSGLGKAYKQYPNRWSRLFEWLVPFSPPRHHLHWILREVEFTIEPGEAVGIVGVNGAGKSTLLKMIAGTTQPTCGEIRVAGRVAALLELGMGFHP DFTGRQNVFMAGQLLGMQVEEIQALMPDIEAFAEIGEAIEQPVRTYSSGMQMRLAFSVATARRPDILIVDEALSVGDAYFQHKSFERIRSFRKAGTTLLI VSHDRSAIQSICDSAILLEQGRMAMRGRPEEVMDYYNALLAEREGQTVRQEMLADGQVRTISGTGEAAILDVRMVDQRQRALEVVEVGQAVTLEVEVEVR QDIERLILGFMIKDRLGQPMYGINTHRLDKALTDLKAGERITYRFAFDMRLGKGHYSVALSLSRLDSHLDRNFEWRDYGLVFHVINNRQEDFVGCSWLGA ETHISRSGEAALDPTSAESTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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