Strain | Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_12, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGTAAAGGCAGTCTAATGCAGCCTTCGGCAAGTTGCTCAGGCTGGAAGATTGGTGTTTTGGTTCCCCCCGGCAACGCGAAAATTCGCAAGGCATACGTTT GCGTCGGGTCTTGTGGGGAGAAACGAAGTTTAGAGGAAAAACATTACACTCATGTCGATTTTCAGGAATTCGCCAAGAAAGAAGACAAAGCAACTTCGGC AACTTGGAACTGCGCCATGCAGATGCCGGAAGTTGAAGTTGGAGTGGCGAGGTTCTCCGACCTAACTTCGCAGGCAAATAACGAAGGTGAACTCGTTTAC CGGCGAGCGAACTGGGAGTGCCTGGTGCACCAGCGCGGGCTTTCTTCGGCTGGCGGTCTTTTTTATTTCTTTTTGCGATTCATGGGCGAATTGATATTCC TAATCGGCGCGGTGAGGTTTTTCAATTTAGCGTCGCCGGCGGCGCTCCTTACCTTGGTCGGGCGCAACAAGACGCCTGACAAGCCATTAGGAGCTCTTCC
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DNA Sequence for Gene |
>NQ78_RS17220
ATGAACCCTTCCCTGAACGCCTTCCGTCCCGGCCGCCTGCTGGTGGCGGCAAGCCTGACCGCCAGCCTCCTGTCGCTGTCCGTGCAGGCCGCGACCCTGA CCCGTGACAACGGTGCGCCAGTGGGCGACAACCAGAACTCGCAGACCGCCGGGCCCAACGGTTCGGTGCTGCTGCAGGACGTGCAACTGCTGCAGAAGCT GCAACGTTTCGACCGCGAGCGTATTCCCGAACGCGTGGTGCATGCCCGCGGCACCGGCGCCCATGGCGAGTTCGTCGCCAGTGCCGATATCAGCGACCTG AGCATGGCCAAGGTCTTCCGCAAGGGCGAGAAGACCCCGGTATTCGTGCGCTTCTCCGCGGTGGTGCACGGCAACCACTCCCCGGAAACCCTGCGCGATC CGCGCGGTTTCGCCACCAAGTTCTATACCGCAGACGGCAATTGGGACCTGGTGGGCAACAACTTCCCGACCTTCTTCATCCGCGATGCGATCAAGTTCCC GGACATGGTCCATGCCTTCAAGCCGGACCCGCGCAGTAACCTCGACGACGACTCGCGACGCTTCGATTTCTTCTCCCACGTGCCGGAGGCGACCCGCACC CTGACCCTGCTGTATTCCAACGAGGGCACCCCGGCCAGCTACCGGGAAATGGACGGCAACAGCGTGCATGCCTACAAGCTGGTCAACGCCAGGGGCGAAG TGCACTACGTGAAGTTCCACTGGAAGAGCCTGCAGGGCCAGAAGAACCTCGATCCGAAACAGGTGGCGGAAGTCCAGGGGCGCGACTACAGCCACATGAC CAATGACCTGGTGAGCGCGATCCGGAAGGGCGACTTCCCGAAATGGGACCTGTACATCCAGGTGCTCAAGCCCGAGGACCTGGCGAAATTCGACTTCGAC CCGCTGGACGCGACCAAGATCTGGCCGGGCATTCCCGAGCGCAAGATCGGCCAGATGGTGCTGAACCGCAACGTCGACAACTTCTTCCAGGAAACCGAAC AGGTCGCCATGGCGCCGTCGAACCTGGTGCCGGGCATCGAGCCCTCCGAGGATCGCCTGCTCCAGGGACGGCTGTTCGCCTACGCCGATACCCAGATGTA CCGGGTCGGCGCCAACGGCCTGGGCCTGCCGGTCAACCGCCCGCGCAGCGAGGTCAATACCGTCAACCAGGACGGCGCGCTGAACGCCGGACACAGTACC AGCGGGGTGAACTACCAGCCGAGCCGGCTCGATCCGCGCGAGGAGCAGGCCAGCGCCCGCTACGTGCGGACCCCGCTGAGCGGCACCACCCAGCAGGCGA AGATCCAGCGCGAGCAGAACTTCAAGCAGACCGGCGAGCTGTTCCGCTCCTACGGCAAGAAGGACCAGGCCGACCTGATCGCCAGTCTCGGCGGGGCGTT GGCGATCACCGACGAGGAGAGCAAGTACATCATGCTTTCCTACTTCTACAAGGCTGACAGCGACTACGGCACGGGCCTGGCCAAGGTGGCCGGGGCCGAT CTGCAGCGCGTCCGGCAACTGGCGGCGAAGCTTCAGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCAACCGGGGCGGCCATCCAGGCCGCCCTTCCTCTATCGGTTTGGTGGGAGATGACGACGATGCGAGGTTGGATTCTGGCAGGCTTGCTGCTCGCGGC GCTGGCCGCGCAAGCTGGCGAGGTGCATGGGGTCGAGGTCGAAGCGCGGTTGCGCGACTACTTCTTCGATACCGCCCGACGCGGTGACCAGGCCATGCTG AAGGAGTTCGTCGAGGCCGGCTTCGACCTCGATGTGCAGGATGCCAAGGGCTATACCGCGCTGATCCTGGCCGCCTACCACGGCCATGGCGGAGCGGTGG AACAATTGCTGGAGGCCGGGGCCGACCCCTGCGTCCAGGATGCGCGCGGCAACACCGCCCTGATGGGCGCCATCTTCAAGGGCGAGGTCCGCATCGCCCG GCGCCTGATCGGCGCGCAATGCAGCCCCGACCAGCGCAACGGCGCAGGGCAGACCGCGGCCATGTACGCGGCGCTGTTCGAGCGCGAGGAGCTGCTCCAG
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Amino Acid Sequence |
>catalase
MNPSLNAFRPGRLLVAASLTASLLSLSVQAATLTRDNGAPVGDNQNSQTAGPNGSVLLQDVQLLQKLQRFDRERIPERVVHARGTGAHGEFVASADISDL SMAKVFRKGEKTPVFVRFSAVVHGNHSPETLRDPRGFATKFYTADGNWDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRSNLDDDSRRFDFFSHVPEATRT LTLLYSNEGTPASYREMDGNSVHAYKLVNARGEVHYVKFHWKSLQGQKNLDPKQVAEVQGRDYSHMTNDLVSAIRKGDFPKWDLYIQVLKPEDLAKFDFD PLDATKIWPGIPERKIGQMVLNRNVDNFFQETEQVAMAPSNLVPGIEPSEDRLLQGRLFAYADTQMYRVGANGLGLPVNRPRSEVNTVNQDGALNAGHST SGVNYQPSRLDPREEQASARYVRTPLSGTTQQAKIQREQNFKQTGELFRSYGKKDQADLIASLGGALAITDEESKYIMLSYFYKADSDYGTGLAKVAGAD LQRVRQLAAKLQD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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