Pseudomonas aeruginosa AZPAE14538, NQ78_RS16685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGTCGAACGAGCCCCCGCCGGTATAGCAGTTGAACAGCGGCGGGAAGACCTTGAGCGGCAGGGCGGCGGACATGAACAGGGGATGGTTCCACAGGCGCTG CAGCATGGCTTCGCCGATCTCCCGGGCCAGCGGGTGGTCCTGCGGCAGTTGCAGGTTGTGCTTGGCCTTGGCCGATTGGTAGCCGGCGGTCGCCTTGCCG TCGGCCCATTCCGCCTGCTCCAGGGCTGCGCGGATCCGGGAGACTTCCTCGGCGGTGAAGATGGCGGGAATATGCAGCAACATGGCGCTGTCCATGAAGG CGAAATGATTGCCAATGATATTGATTTGCATTGGCCATGTAAAACCGCCAAATGTTCCAGACGAGCGAGATGGGAAAAAATGTAATGAGAAAATTGTAAA GAATGTAAATTCCTGTCGAATGCGAATCCGTAATAATTGATAACAATTCTGATCTGCAATAAATTCCGCGACCTTCACAGCTCCCGGGGAGGGGTTTCGA
DNA Sequence for Gene
>NQ78_RS16685
ATGTCGCGTCAGTCCACGGATACCGCCGTTTCTTCGCAACGTCTGCTGGCTTCGGCCATCGGTGTGGCCATCACCGCCATCGCCGCACCGCAGGCAGCCC ACGCCGACGAGGCCGGGCAGAAAAAGACCGACAAGGACCGCGTACTGTCGCTGGATGCGGCCACCATCGTCGGCGAGCAGCAGGACGAAACCACCTACAA CGTCGACCGCTCGGCGTCGAAGAAGTACACCGCGCCGCTGCTGGATACGCCGAAGACCGTCACCGTGATTCCGCAGCAGGTGATCAAGGACACTGGCGCC CTGACCCTGGCCGACGCACTGCGCACCACCCCGGGTATCACCTTCGGCGCGGGCGAGGGCGGCAACCCCGCAGGCGACCGGCCATTCATCCGTGGCTTCA ACGCCGAGAGCGATACGTTCCTCGACGGTATGCGCGACGTCGCCTCGCAAACCCGCGAGGTGTTCAACGTCGAGCAGATCGAGGTCAGCAAGGGCCCGGG CTCGGCCTACACCGGCGCCGGCTCCACCGGTGGCAGCCTGAACCTGATCAGCAAGACCGCCAAGCAGGACAACTTCACCGACGCCGGCTTCACCTGGGGC TCAGACCAGACTCGCCGCACTACTCTCGACGTGAACCGGATGATTGGCGACAACGCCGCCTTCCGCCTCAACCTGATGAAGCACGATGCCCACGTCGCAG GGCGCGACGAAGTCAGCGTCAGCCGCTGGGGCGTGGCTCCGACCGTTACCTTCGGCTTCGACACGCCGACCCGCGCCACCCTGTCCTATTACCATCTCAG CACCGATGACATGCCGGACTACGGCCTGCCGCTGACCAACGTCAACCGCAGCAAAGCCAATCCGAGCAAGCCGGCCTCGGTGGATCGCGATAACTTCTAT GGCCTGAAGGACCGCGACTACCGCAAGAGCACCACCGACAGCGGCACCTTCCGCATCGAGCATGACCTGAACGACAACCTGACCCTGTCGAATAGCACCC GCCTGGTGCGCACGACGCTCGACTACATCGTCAGCAACCCCGACGACAGCCGTGGCAACGTTGCCAACGGCTACGTCTACCGTTCGGCGAAAAGCCGCAA TTCGACCTCGAAGGGCTGGGTCAACCAGACCGACCTGAAGGCCAACTTCGAAACCGGCTTCATCAAGCACACCCTGGTGACCGGCCTGGAGTTCAGCTAC GAGGACGTGCACAACCGTCCGTACGCCATTACTTCCGGCGGCGCCGGCAACACCTGCAATGCACGATTGCTCGCCAGTGGCGACTGCACCAGCCTGAATC GCCCGACTCCGGGCGACAACTGGACCGGCAGCATCACCGACGGCCTGGCCTATACCGATACCGACACCAAGACCAGCGCGGCTTATGTGTTCGATACCCT GAAGCTAAGCGAACAATGGGAGCTGAATCTCGGTCTGCGCTACGACGACTTCGATACCAAGTCCAGCGGCTACCAGACGGCTGGCCGCAACGGTCCCGCC GGCTACTTCAAGCGCGAGAACAACAGCCACTTCTGGAACTACCAGACCGGCCTGGTCTACAAACCGGCGCCCAACGGCAGCATCTACCTGGCCTGGTCGA CCTCGAGCAACCCCACCGGCGAGACCGGCGGCGAGGGCCAGGCGGATATCAGCGTAGGCAACAACGGGTTGGATCCGGAGCGTAACCGTAACCTCGAACT GGGTACCAAGTGGGCCTTCTTCGACGATGCTCTGTCGCTGAACGCCGCGCTTTTCCGCACCGACAAGACCAATGCCCGGGTCGCTTCGCCGGATGTCTCC ACTCTTCAGGTACTGGACGGCGAGCAGCGGGTGCAGGGCGTCGAGCTGGGCTTCAATGGCAAGCTGACCGAGAAGTGGAAGGTCTTCGGCGGCTACACCT ACCTCGACAGCGAAATCCGCAAGTCGACGGTGAAGAGCGACGAAGGCAACAAGATGCCGCAGACCGCGCAGAACAACTTCACTCTGTGGACCACCTACGA TCTGTTGCAGAACTTCACTATCGGCGGTGGTACCACCTATGTGGACAAGCAGTACGGCAACACTGCGAACTCTACCTATATCCCGTCCTACTGGCGCTAT GACGCCATGGCCAGCTACAAGGTGAGCAAGAACGTCGACCTGCAACTGAACGTGCAGAACCTGACCGACAAGCGCTACTTCGACCAGGTCTACAGCACGC ACATGGCCCACGTCGCTCCGGGCCGCACGGCATTGCTCGGGGTGAACTTCCACTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGCCGCTCTCGCTCCCCACGAAAGCCCCATTCCCCCTGCGGGATGGGGCTTTCCCGCATCCAGGTGGGTAAATAGAGCGTAAAGAACGTTAATTCGGCT TTATCGCAACTGATTATCAAATAGAATTGCCCGCCGACGTCCTCGTGTCGTCTGGCCGGCGCTTGGCGTCGGCGTAGTCCCGTTGTTGCCGCGCGGCGGC CGTGAAGGTGATCCTGTGAAGAAAGTCTGGTTCCAGTTGCATTGGTTCTTCGGTATCAGCGCCGGCCTGGTGCTGGCGCTGATGGGCGTCACCGGAGCGA CCCTGTCGTTCCAGGACGAGCTGATGCGCGCGCTCAACCCTGACGTGCTGGTGGTGCAGAAGCGCCCCGAGGGTGTGCTGCCGCTGGACGAACTGGTGCG CCGTATCGAAGGTGCCGAGCCGGGGCGGAAAGTGGCCTTCGTCTGGGTCGAGATGGACAGCGACAAGGCCGGGCGGATCTTCTATACCCCGCCGCCGGGA
Amino Acid Sequence
>ligand-gated channel protein
MSRQSTDTAVSSQRLLASAIGVAITAIAAPQAAHADEAGQKKTDKDRVLSLDAATIVGEQQDETTYNVDRSASKKYTAPLLDTPKTVTVIPQQVIKDTGA LTLADALRTTPGITFGAGEGGNPAGDRPFIRGFNAESDTFLDGMRDVASQTREVFNVEQIEVSKGPGSAYTGAGSTGGSLNLISKTAKQDNFTDAGFTWG SDQTRRTTLDVNRMIGDNAAFRLNLMKHDAHVAGRDEVSVSRWGVAPTVTFGFDTPTRATLSYYHLSTDDMPDYGLPLTNVNRSKANPSKPASVDRDNFY GLKDRDYRKSTTDSGTFRIEHDLNDNLTLSNSTRLVRTTLDYIVSNPDDSRGNVANGYVYRSAKSRNSTSKGWVNQTDLKANFETGFIKHTLVTGLEFSY EDVHNRPYAITSGGAGNTCNARLLASGDCTSLNRPTPGDNWTGSITDGLAYTDTDTKTSAAYVFDTLKLSEQWELNLGLRYDDFDTKSSGYQTAGRNGPA GYFKRENNSHFWNYQTGLVYKPAPNGSIYLAWSTSSNPTGETGGEGQADISVGNNGLDPERNRNLELGTKWAFFDDALSLNAALFRTDKTNARVASPDVS TLQVLDGEQRVQGVELGFNGKLTEKWKVFGGYTYLDSEIRKSTVKSDEGNKMPQTAQNNFTLWTTYDLLQNFTIGGGTTYVDKQYGNTANSTYIPSYWRY DAMASYKVSKNVDLQLNVQNLTDKRYFDQVYSTHMAHVAPGRTALLGVNFHF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site