Pseudomonas aeruginosa AZPAE14538, NQ78_RS03420
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTAGCCCTCCAGGTAGCCCGCCAGGCCGCTCTCGGTCCAGGCGCGCAGGCGGCCGGGATGGTCGTTCGCCGGACAGGCCTCGACGGCATTCGCGATGCG CTGCTGGAAAGCCTGGGTGAAGCGCTCGCGCAGGGCCAGGAGGATGTCGGTCTTGGCTTGGAAGTAGTGATAGAAGGTACCCTTGGCGACCCCCGCGGCA GCGACGATGTCGCTGATGGTGGTGGCGTCCACACCCTTGTCTAGGAACAGTTGCTGCGCCGCTGCCATCAGTTCCTCGAGACGAACCTCCGCAGGCTTGG TGCGCGGTTGGCGGGCAGGCTGTTCGGCGTGGCGATCGGGCATGGAGCGCGGGTCCGGTGGTTGGGTTGGCCGCAGTGTAAAAGAGCGTGGAGGGGAAGA CGAGGCATGACAGGAAGATGAGAATGTTTCGCGATATCTATTGACTGACCGTCGGTCAATGGATTATTCCTGGGCCAGCGCCCTCTCATCGGAGTACTCC
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| DNA Sequence for Gene |
>NQ78_RS03420
ATGAACCCTTCGCGTCGTGTCGCCCTGGTCGCCGCCATTTACCTGGGAACCTTCATCGCCTCGCTCGACATCAGCATCGTCAACCTCGCCCTGCCGACGC TGCAGTACGCCCTGGATACCGACTTGGCCGGCCTGCAGTGGGTGGTCGACGCCTATGCGCTGTGCCTGAGCGCCTTCATGCTGTCTTCCGGACCGCTGAG CGACCGCTACGGTCGCAAGCTCACCTGGCTGCTCGGGGTCGGCCTGTTCAGCTTCGGTTCGCTGCTCTGCGCGCTGGCCACCTCGCTGCCGCTGCTGCTG TTCGGACGCGCGGTCCAGGGCATCGCCGGGGCGCTGTTGATACCCGGCGCGCTGTCGATCCTTACCCAGGCTTTCCACGATCCCGGCCAGCGCGCCCAGG TGATCGGCGGCTGGACCTCCTTCAGCGCGCTGTCGCTGATCCTCGGCCCGCTGCTCGGCGGCCTGCTGGTGGAGCACGCCGGCTGGCAGAGCATCTTCCT GATCAACCTGCCGCTCGGCCTGCTGGCGCTCGCCCTGGGCCTGTGGGGCATCGAGGAAACCGCGCACCCCGAGCACGCCGCCTTCGATCCCCTGGGGCAG TTGCTCAGCGTGGTCTGGCTGGGAGCGTTGACCTACGCCCTGATCGCCGCGGGAGAGGGCGGCTGGTTGTCTCCCACGGCCTGGCCGGCGCTGCTCCTGG CCGGGGTCGGCCTGCTTGGCTTCCTCTTCGTCGAGCGGCGGACCGCCCGACCGCTGCTGCCCCTGGGGTTGTTCCGCCAGGCCGGGTTCGCCGTCTGCAA CCTGGCCTCGTTCGTCCTCGGTTTTTCCGGCTACGCCAGCCTGTTCTTCCTCTCCCTGTTCTTCCAGCAGGTGCAGGGTGCCTCGGCGCAGCAGGCCGGC TTCTACCTGGCGCCGCAGTTCCTCGCCATGGGCGCACTGTCCATGCTGTTCGGCCGGTTGCAGCGGCACGTACCGCTGCGACGCCTGCTGGTGCTGGGCT ACCTGGTGATCGGCCTGGCCATGCTGGCGCTGGCCGCTTGCGGTACGGGAACCGCGTATCCCTGGGTCGGCCTGTTGCTGGTGGCGCTCGGCCTGGGCAT GGGCCTGGCCGTTCCCGGCACCGGTCTGGCGGTCATGGCGAGCGTGGCCCGCGAGCGTTCCGGGATGGCCTCGGCGACCATGAATACCCTGCGCCAGGCC GGCATGGCCGTCGGCATCGCGTTGCTGGGAGCGCTGCTGAGCGGGCGGGCGATCGTCGTCCTGGGCGATCGGCTGGAGGGGCTGGGGATTGCCGATGCGC AACGGCTCGCCACCCAGGCGGTCACGTCCCATCGCTTGCCTGGTTCCCTGGCGGGGCTCGACGCCGAGCTGCCGGCCGCGCTGGCCGAGGGCTTCCGTCT GGCTATGCTGGTGGCCGGAGCCAGCGCCCTGCTGGCCGCCGCGCTGCTCTGGCGCCTGCGCGTTAGCGCCGGCCCGGCGGCGGATACAGTTGGCGCATCT GGACGAACGGCAGGGGTACAGTTGCAGGCCGATAGACACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCTCGGGTCACGATGCTGGCGTGGGGGCGATTTCCTTGCGTTATGCTGCTTGAAGCGAAGAATATTCGCGTATTCCAACTGTTGTGCTAGGGTATGGCC TGCGACAACCTGTCGCAGGCAGGTAAAAGCCCTACTTTATCTATGTTTGAGAAAGTCTATTGCAAGATGTGTCATAGGCTCCTCAGCTGAAATGAATTGT AATAACTGACGCTCAGTTTCGGTCCAACGAGCGTCGCGCGAGTCTCTGCTCCGCATCGCGATAAATGGGTTCCTGCCTTGCCTGTTGCACAACAAATAGC CGACCGATAACTGCGACCTGATCACCCGGCGGGAAGGGCAATCCTTCTCGCCCAGGCATGCACGTGCCTTGGCCGCCCTTGGCCTCTTCCGGCACAGCTT CGAAAACGCTGTTCATCAAGGAACGACTCAGCGCGTGGAACGAGTCCGCCACCGGAATCGGGAAAGGTATCCGCTTGCCTTCTCCCGTGGCCGGGCAATG
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| Amino Acid Sequence |
>MFS family transporter
MNPSRRVALVAAIYLGTFIASLDISIVNLALPTLQYALDTDLAGLQWVVDAYALCLSAFMLSSGPLSDRYGRKLTWLLGVGLFSFGSLLCALATSLPLLL FGRAVQGIAGALLIPGALSILTQAFHDPGQRAQVIGGWTSFSALSLILGPLLGGLLVEHAGWQSIFLINLPLGLLALALGLWGIEETAHPEHAAFDPLGQ LLSVVWLGALTYALIAAGEGGWLSPTAWPALLLAGVGLLGFLFVERRTARPLLPLGLFRQAGFAVCNLASFVLGFSGYASLFFLSLFFQQVQGASAQQAG FYLAPQFLAMGALSMLFGRLQRHVPLRRLLVLGYLVIGLAMLALAACGTGTAYPWVGLLLVALGLGMGLAVPGTGLAVMASVARERSGMASATMNTLRQA GMAVGIALLGALLSGRAIVVLGDRLEGLGIADAQRLATQAVTSHRLPGSLAGLDAELPAALAEGFRLAMLVAGASALLAAALLWRLRVSAGPAADTVGAS GRTAGVQLQADRH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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