Pseudomonas aeruginosa AZPAE14538, NQ78_RS02560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14538 AZPAE14538_contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGTCCTGCTCAACGGCCTTTTTCATTTTTTCTAGCCCCAACAGCCCTCGTCCTGACAACTCAGGCTAGTGGTCGAAACGCGCCCCAACCAGCTGGGTAG CCTCCGGTCGACCATTGACCGGGGTGCTGGTGACCAGCTGACCTGCCCCCCGATTTCAGTACCACGAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACTTGGCGGGCGAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAATAGCCGATTGA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCTCGGGGAAAAGGGTAAGCCCGACAGCGCGGCGGGAGGCGGTGCAGGAG
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| DNA Sequence for Gene |
>NQ78_RS02560
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCCGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGGCGCCACCATGGCGTCGCGGTGGAGCGCGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGGCGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTAGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGG TCTGGCGGCGGGATTACAACGAACACCGGCCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCT GAAGCAGGAAAAATTAATATCAACCCCAGGGACTACTAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAATTGGGGGCAGGTCACATACCTTCAGTTCATTAACGAACTCCCACTTTCAAAATTCATCCATGCCGCCCCTTCGCGAGCTTCCGGA CAAAGCCACGCTGATTGCGAGCCCAGCGTTTTTGATTGCAAGCCGCTGCAACTGGTCAGGCCGTTTCCGCAGCGCATGAAGTCCTGGCCGATCTACCGGC AGGGCCAGCCATCGTTCGACGAATAAAGCCACCTCAGCCATGATGCCCTTTCCATCCCCAGCGGAACCCCGACATGGACGCCAAAGCTCTGCTCCTCGGC AGCCTCTGCCTGGCCGCCCCATTCGCCGACGCGGCGACGCTCGACAATGCCCTCTCCGCCTGCCTCGCCGCCCGGCTCGGTGCACTGCACACGGCGGAGG GCCAGTTGCACCAGCCAATCATCCTTGAGGCCCGGCGCTCCACCGGCGAATGCGGCTGTACCTCAGCGCTGGTGCGATATCGGCTGCTGGCCATGCATGC
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| Amino Acid Sequence |
>transposase
MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRHHGVAVERERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPSKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAVWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGTTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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