Pseudomonas aeruginosa B136-33, G655_09220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other B136-33 genes in this class
Motility & Attachment Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 116 153 -
Coils Coil Coil - - 462 482 -
Gene3D G3DSA:3.10.350.10 LysM domain IPR036779 LysM domain superfamily 139 214 1.5E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 245 259 -
Coils Coil Coil - - 295 343 -
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 523 602 3.8E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 348 421 -
MobiDBLite mobidb-lite consensus disorder prediction - - 213 235 -
MobiDBLite mobidb-lite consensus disorder prediction - - 356 370 -
SMART SM00257 LysM_2 IPR018392 LysM domain 151 206 0.0037
CDD cd00118 LysM IPR018392 LysM domain 151 205 3.15206E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 213 288 -
Gene3D G3DSA:1.20.58.2200 - IPR038440 FimV, C-terminal domain superfamily 834 895 1.9E-27
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 503 583 5.31E-5
NCBIfam TIGR03505 JCVI: FimV/HubP N-terminal domain IPR020012 Motility protein FimV, N-terminal 158 230 3.8E-30
MobiDBLite mobidb-lite consensus disorder prediction - - 387 421 -
NCBIfam TIGR03504 JCVI: FimV/HubP C-terminal domain IPR020011 Motility protein FimV, C-terminal 851 894 6.4E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 761 792 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.