Pseudomonas aeruginosa B136-33, G655_06985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00354
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009750 response to fructose
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02417
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other B136-33 genes in this class
Carbon compound catabolism Other B136-33 genes in this class
Transport of small molecules Other B136-33 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IPR001761 Periplasmic binding protein/LacI sugar binding domain 62 246 1.7E-20
Pfam PF00356 Bacterial regulatory proteins, lacI family IPR000843 LacI-type HTH domain 3 50 3.6E-18
Gene3D G3DSA:3.40.50.2300 - - - 62 154 1.9E-25
CDD cd06274 PBP1_FruR - - 63 326 9.32729E-94
SMART SM00354 laci3 IPR000843 LacI-type HTH domain 1 73 3.8E-29
CDD cd01392 HTH_LacI IPR000843 LacI-type HTH domain 5 58 8.83568E-17
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 60 315 2.94E-52
Gene3D G3DSA:3.40.50.2300 - - - 155 329 1.2E-32
FunFam G3DSA:1.10.260.40:FF:000008 Fructose repressor (Catabolite repressor/activator) - - 1 61 4.9E-31
PANTHER PTHR30146 LACI-RELATED TRANSCRIPTIONAL REPRESSOR - - 1 328 8.9E-67
SUPERFAMILY SSF47413 lambda repressor-like DNA-binding domains IPR010982 Lambda repressor-like, DNA-binding domain superfamily 2 58 1.22E-14
NCBIfam TIGR02417 JCVI: D-fructose-responsive transcription factor IPR012781 D-fructose-responsive transcription factor 2 329 0.0
Gene3D G3DSA:1.10.260.40 - IPR010982 Lambda repressor-like, DNA-binding domain superfamily 1 61 6.9E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.