Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTGTGCGAGGAAGGCGAGTCGCCGCGCGGCTACGTCGAGGTTCGGCACATCGGCAGCCAGGTACAGAAGATGGTGCAGGAGGCACTGGACGCCTTCGCC CGCTTCGATGCCGACCTGGCGCTGTCCGTGGCGCAGTACGACAAGACCGTCGATCGCGAATACAAGACCGCCCTGCGCGAGCTGGTCACCTACATGATGG AAGACCCGCGGGCGATATCCCGCGTGCTCAACATCATCTGGGCCCTGCGCTCGCTGGAGCGCATCGGCGACCATGCGCGCAACATCGCCGAGCTGGTGAT CTACCTGGTTCGCGGCACCGACGTTCGCCACATCGGCCTGACCCGCATGAAGGAAGAGGTCGAGAACAACCGCGGCGAGTGATCTTCCGCAGGCAAGGCT CCCTTGACCTGGAGCCTTGTTTCTTCGCGCGACTGCAGCAAGGCTTGGCATCCTGCCAGCAGGGGAGGCTATCCTAGGCGGACCTGTCCAGGAGAAGTCG
|
|
DNA Sequence for Gene |
>PADK2_28555
ATGAGCAAAGTCAGCGCGCTAGTGGTGGATGACGCCCCCTTCATCCGAGATCTGATGAAGAAAGGGTTGCGCGACAACTTCCCCGGCCTTCATATCGAGG AGGCCGTGAACGGCCGCAAGGCCCAGCAACTGCTCAGTCGGCAGAACGTCGACCTGATCCTCTGCGATTGGGAGATGCCGGAGATGTCCGGCCTCGAACT GCTGACCTGGTGCCGTGCCCAGGAAAACCTCAAGACTACCCCGTTCATCATGGTCACCAGTCGCGGCGACAAGGAGAACGTGGTCCAGGCGATCCAGGCC GGGGTGTCGGACTACATCGGCAAGCCATTCTCCAATGACCAACTGGTGGCCAAGATCAAGAAGGCCCTGAGCCGCAGCGGCAAGCTGGAAGCCCTGGCGG CCCACGCGCCGCGCCGGGAGATCGCCAGCGGCATGGCCAACGATTCGCTGGCCGCCCTGACCGGTGGTCGCGCCGAGGTGATCAAGCCTGCCGCCAGTCC GGCAAAACCGGCCCCCGCGCCGAAGCCGGCTTCGGCTCCCCAGGCCAGCGCGCGTCCCGCCGGCAGCGGCAACCCGCTGGGGCAGGCGCAATTGCGCCTG CCGCAGAGCAGCATGCCCTGCGTGATCAAGGCGGTCAGTCTGAAGGAAGCGCAACTGGTGGTGAAGCGCGCCGACCCGTTGCCGCAGGTGCTGGAAAGCG CGGTGCTGGACCTCGAGGAAAACAGCGACGTGGCGCGCCTGAACGGCTACCTGCACGCCATCGCCGCGCTGGAGCCGAAGCCGGATAGCGATTGGCTGCT GTTGACCCTGCGTTTCGTCGACCGCGACCCGCAGAAGCTCGACTACCTGTCGCGCCTGATCGCCCGCGGAAGTACCCAGAAGCACTACGTTCCCGGCGCC TGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGGTTTTTTCCCGACGATCCGTTCACAGCCCGCTCGCTGTCGTCTCGCCCTGGCAATAAAGCGCTGCTAGTCTTGCCGATTCGGGATAACCAGAACGAC ACGATCCGTGCAGTCATGCTAGGGCGCCTTCTCCTTCTCTGTGGCCTGTTCGCCGCGGCAGCTCCGGCTGCGGCCCTGACCATCTACAAGTACACCGACG CCAATGGCGTGGTGACCTACTCCGACCGCGCCGTGGCCGGGGCGCAGGTGTTCGTCTTCCGCGACCGGATGGTCGAGCACCTGGAACGGGAAGTGAAGCT GGAGACGAAGAAGCACGCGGGTGGCGAGACCCTGCAGGTGCGCAACGACCTCTACGCGCCGGTCGAGGTCGAGTTGCGGATCCGCAACCCGCGCAATGCC GTTGGGGTGCCCGACGGGCCGATTCGCTGGGTGGTCCCGGCGCGCAGCCAGGTGCGCCTGGCGACCCTGGCGCCGCGCAAGGCCGGCAAGCCGATGAGCT
|
|
Amino Acid Sequence |
>two-component response regulator
MSKVSALVVDDAPFIRDLMKKGLRDNFPGLHIEEAVNGRKAQQLLSRQNVDLILCDWEMPEMSGLELLTWCRAQENLKTTPFIMVTSRGDKENVVQAIQA GVSDYIGKPFSNDQLVAKIKKALSRSGKLEALAAHAPRREIASGMANDSLAALTGGRAEVIKPAASPAKPAPAPKPASAPQASARPAGSGNPLGQAQLRL PQSSMPCVIKAVSLKEAQLVVKRADPLPQVLESAVLDLEENSDVARLNGYLHAIAALEPKPDSDWLLLTLRFVDRDPQKLDYLSRLIARGSTQKHYVPGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|