Pseudomonas aeruginosa AZPAE12140, NQ02_RS04655
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGAACAGGCTTGCCGGATTCACCGAATAGACCAGCAGGGAACCGCAGAACAGCCCCAGGCCCAGCAGGCCCAGGCGGCGCAACCAACCGTCGTGGCGG AGCAATACCACCAGCAGGGCGCCGTACAACAGGCAATCGACCCGCGCCACCGAGTCCTTGACCTGCAACGACTGTTCCCAATCCCCCAGCCACCATCCAG CGGCCACGCCCAGCACGACTCCGGCGCCGACATGAATGCCCGCCTGGATCATCGTCACCCTTCCCCCCTCGGAAATGGTCGGACAGTGCAAGCCGCCACT ATGCCCACGGCAAGCTGAACCATCGCTGAACGAATACCAGCAAATGGCCTTCGGCCACTTCGCCGACGCAACTCCTGCAAAACCCGGCGGTCTTCTCCCT GTGACAGGACGCCGCCCCGCACAGAAAAAATCTGCTGCGACCACTTGGGAACTCGCCCGAGAGGCCATACTCTGTCGCGCAAATTCCCATGAGGTGGCTG
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| DNA Sequence for Gene |
>NQ02_RS04655
ATGCGCACCGACGCTCCCGTTCCAGAACATCCCGCTCCACCCAGCTCTCCCGCGTCCCCACAACGCATCCGGCTGATCGATCGGATTACCGCCTACCGCC AGCCCATCGGCCTGGTCTTCACCTTGCTGCTGTTCGGCCTGGCGCTGGTGGCCTGCTACCACCTGCTACGGGAGATCGATCCCGGCGCCCTCCACGATGC CATCGCCGACGTGCCCAGGCCGGCGCTGCTCGGCGCCCTGAGCGCGACCGCCCTCGGCTTCGTCATCCTGCTCGGCTACGAGTGGTCGGCCAGCCGCTTC GCTGGCGTCACGCTGCCCATGCGCAGCCTGGCCACCGGCGGCTTCAGCGCCTTCGCCATCGGCAATGCGGTAGGCCTGTCGCTGCTTTCCGGCGGCTCCG TACGCTACCGACTGTATTCCCGGCATGGCATCGGCGCTGCCGAAATTGCCCGGATGACGCTATTTGCCAGCCTTTCCCTGGGCTGCGCACTGCCGGTGCT GGCGGCACTCGCCGCACTCTGCAATCTCGACGATGCGGCGTCGGCGCTGCACCTGCCCCACGCCCTGGTCGCCGTCATCGCGATCGCCGTCCTGTTGCTG GCTGTCGGCCTGGTGGCGTTCCTGGCTCGGCACCGTCTGCCGGGAGAACGGCCGTCCCCCGACAGCCTGCTGGTCCGCCTCGGCCGCCGCAGCCTGCGCC TGCCAGGCCTGCGCCTGTCGCTGCTGCAACTGCTGATCACCGCCCTCGACGTCGCCGCCGCCGCTACCGTCCTTTATCTGTTGCTGCCGGAAACCCCACC CTTCGCGGCGTTCCTGCTGGTCTACCTGCTCGCCCTGGCCGCCGGCGTACTCAGCCACGTACCAGGCGGAGTCGGGGTGTTCGAGGCGGTGCTGCTGGCC GCGTTCGCCGGCCAACTGGGCGCCGCGCCGCTGGCCGCGGCCCTGCTCTTGTACCGCTTGATCTACGTGGTGCTGCCACTGCTGCTGGCCTGCCTGTTGT TGCTGTTCCTCGAAGCGCGCCGGTTGTGGGTGACGCGCCAGGCGATTCGCGTCGCCTCGGGTTTCGCCGCACCGATCCTGGCGATCCTGGTCTTCCTCTC CGGTGTCGTGCTGCTGTTTTCCGGCGCCACACCGGCGATCGACACCCGCCTGGAGCACCTCGGTTTCCTCATTCCACATCGCCTGATCGATGCCTCGCAC CTGGTCGCCAGCCTGATCGGCGTGCTCTGCCTCCTGCTCGCGCAGGGTTTGCGCCGACGGCTGTCGGCCGCCTGGGCCCTGACCCTGGTGCTGTTGCTGG TGGGCGCCCTGCTTTCGCTGCTGAAAGGCTTCGACTGGGAAGAAGCCAGCCTGCTGAGCCTGACCGCCGCGCTGCTCGCCATGTTCCGCCGCTCCTTCTA CCGTCCCAGCCGGCTGATGGAAGTCCCCTTCTCGCCGCTCTACGTAGGCGCCAGCATCTGCGTGGTCGGCGCCTCGGTCTGGCTGCTGCTGTTCGCCAAC CAGGACGTGCATTACAGCAACCAGCTCTGGTGGCAGTTCGCCCTGGACGCCGACGCCCCGCGCGCCCTGCGCGCCGCCCTCGGCAGTTGCCTGCTGCTCC TGGCCCTGGCCCTTGGCTGGCTGCTGCGCGCGGCACCGCCGGCGATCCGCGAGCCGAACGCGGAAGAGCTGCAGCGCGCGGCGCGGATCATCCGCCACTC GGACCAGCCGGATGGCGGCCTGGCCCTGACCGGCGACAAGGCCCTGCTCTTCCATGAGAGCGACGACGCTTTCCTCATGTACGCCCGCCGCGGTCGCAGC ATGATCGCCCTGTACGACCCGATCGGCCCGGCCATGCAGCGCGCCGAACTGATCTGGCAGTTCCGCGACCTCTGCGACCTGCACCATGCCCGCCCGGTGT TCTACCAGGTGCGTGCCGAGAACCTGCCGTTCTACATGGACATTGGCCTGACCGCCCTCAAGCTCGGCGAAGAAGCGCGAGTCGACCTGCTGCGCTTCGA CCTGGAGAACAAGGGCAAGGAAATGAAAGACCTGCGCTACACCTGGAACCGCGGCCAGCGCGACGGCCTGGCCCTGGAGTTCCATGAACCGGGCCAGGCT CCGCTGGACGAGCTGAAGGCGATATCGGACGCCTGGCTGGGCGGCAAGCAGGTGCGCGAGAAAGGCTTCTCCCTGGGCCGCTTCACCCCGACGTACCTGA ACTTCTTCCGCATCGCCATCGTCCGCCACCAAGGCAAGCCGGTGGCCTTCGCCAACCTGCTGGAGACCGACAGCCGCGAACTGGCGAGCCTCGACCTGAT GCGCGTGCACCCGGACGCGCCGAAGCTGACCATGGAGTTCCTCATGCTCGGCCTCATCCTCCACTACAAGGCCCAGGGCCACGCGCGCTTCAGCCTCGGC ATGGTGCCGCTGGCCGGGCTCCAGCCAAGGCGCGGCGCACCGTTGACCCAGCGCCTGGGCGCGCTGGTCTTCCGGCGGGGCGAACAGTTCTACAATTTCC AGGGGCTGCGACGCTTCAAGGACAAGTTCCAGCCCGACTGGGAACCCCGCTACCTGGCCGTGCCAGCCGGGCTCGACCCGCTGGTGGCCCTGGCCGATAC CGCCGCGCTGATCGCCGGCGGCCTGACTGGATTGGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TATGTCTGTCGTGAAACGTCACTGGCGCCGTTTTCTGGTCGCCGCCCTGGTGCTGATCGTCGGTGCCGCCCTGCTGCTCTGGAGCCGACCGGCGGCCCAG GCGAAACTGGAAGCCCTGGACCTCGACGACGGCGGCCACGCCACCCTTGCCGAACCCGGCGAGAAGCCGCGCTCGCGGGTGGTGGTGATCGCCGCCCCCG AACAGCAACTGAACGACGCCCAGATGCTGAACCTGGCTCACGACAGCGCCGCCCGGGTGATCCAGTACTTCCCCCCGGAAAACGGCGATTGCAGGGCGCA GCAGTCCCGGCTCGAAGCGGTCATTGCCCGCCTCGGCGGCAAGCCGAACCTAGTCGCCGGCATCGGCCCAGGCTCGACCACCGCCTGGCGCTGGCTCGCC AGCCAGGACGACGACAAGGCCAAGGCGCTCTCGGTCGGCTTCGACATTGCCCTGGCCGAGCGCGACTGCGACGCCCCGCTGCCGCACCAGGCGTCGCACG
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| Amino Acid Sequence |
>hypothetical protein
MRTDAPVPEHPAPPSSPASPQRIRLIDRITAYRQPIGLVFTLLLFGLALVACYHLLREIDPGALHDAIADVPRPALLGALSATALGFVILLGYEWSASRF AGVTLPMRSLATGGFSAFAIGNAVGLSLLSGGSVRYRLYSRHGIGAAEIARMTLFASLSLGCALPVLAALAALCNLDDAASALHLPHALVAVIAIAVLLL AVGLVAFLARHRLPGERPSPDSLLVRLGRRSLRLPGLRLSLLQLLITALDVAAAATVLYLLLPETPPFAAFLLVYLLALAAGVLSHVPGGVGVFEAVLLA AFAGQLGAAPLAAALLLYRLIYVVLPLLLACLLLLFLEARRLWVTRQAIRVASGFAAPILAILVFLSGVVLLFSGATPAIDTRLEHLGFLIPHRLIDASH LVASLIGVLCLLLAQGLRRRLSAAWALTLVLLLVGALLSLLKGFDWEEASLLSLTAALLAMFRRSFYRPSRLMEVPFSPLYVGASICVVGASVWLLLFAN QDVHYSNQLWWQFALDADAPRALRAALGSCLLLLALALGWLLRAAPPAIREPNAEELQRAARIIRHSDQPDGGLALTGDKALLFHESDDAFLMYARRGRS MIALYDPIGPAMQRAELIWQFRDLCDLHHARPVFYQVRAENLPFYMDIGLTALKLGEEARVDLLRFDLENKGKEMKDLRYTWNRGQRDGLALEFHEPGQA PLDELKAISDAWLGGKQVREKGFSLGRFTPTYLNFFRIAIVRHQGKPVAFANLLETDSRELASLDLMRVHPDAPKLTMEFLMLGLILHYKAQGHARFSLG MVPLAGLQPRRGAPLTQRLGALVFRRGEQFYNFQGLRRFKDKFQPDWEPRYLAVPAGLDPLVALADTAALIAGGLTGLVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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