Pseudomonas aeruginosa AZPAE12140, NQ02_RS28095
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_38, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGTGACGCGGGCGAACAGCTCGGCATAGCTGATCCGCAACGGTTCTTCGGCGGCGCTGCCATGCAGCAGGCAGCTCAGGGCGATACGCTGGCCGTGGCG CTGGGCCGAGCGTTGCAACAGTTCGTAGGTGCTGGACGGCAGGTCGCGCTGTTCCAGCGGCACGCGTTCCAGGGCTTCGATATCGCTCAGCCCGACGATC GATGGGGACGGATTCATGGTTTTCTTGTTCTTCCGTTGGTGAGTGGGCGGACACTCGCCGGATCGCTCCGGCACCGTCCCGAAGATGCCACCCCCGTCGT CGCCCTACCGTTGTCTTTTTGTAGCGCGCCACCGGTCGCGCGCACGAGTCCTCCCGAAGGCTGCCCCGGGAGCTTCGCGCAGCCCCCTCCAGGCCCCGTC CGGCCAGGGCTGGAGGGCGCCGGCCAAGCATGGATTTCTCCCCGCTGGCAACATGCTTTACACTGGCGCCCGTTCATTCCTTAACCACTACGAGATCGCC
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| DNA Sequence for Gene |
>NQ02_RS28095
GTGCTCAAAGCACTCAAGAAAATCTTCGGCAAGGCCGACGGAACCCAGCCGCAGAGCGGTTCCTCCCCGGTCCCGCAAGGCCCTGCCGGCGCTACCGCGA AAGGTACCGCCCCCACCGGCGAAAAGCCGACCGAGAAACGCCCACGCAAACCGCGCCCCGCGCGCGCCGACAACGAGTCCGGCGCCCCGCGCGCCGCTGA AAAGGCCGAGAAAGGCGAAAAGCCCGCCAAACCCGCCGGCAAAGAAGGCCGGGACGCCAAGCCGCGCAGCGACAAGCCGCGCCGCGAACGCAAGCCGAAG CCGGTGGACAACTGGAAGCTGGAAGACTTCGTGGTCGAACCGCAGGAAGGCAAGACCCGCTTCCACGACTTCAACCTCGCCCCGAGCCTGATGCACGCCA TCCATGACCTCGGCTTCCCCTACTGCACCCCGATCCAGGCGCAGGTACTGGGCTTCACCCTGCGCGGCCAGGACGCCATCGGCCGCGCCCAGACCGGCAC CGGCAAGACCGCCGCGTTCCTCATCTCGATCATCACCCAATTGCTGCAGACCCCGCCGCCGAAAGAGCGCTACATGGGCGAGCCGCGCGCGCTGATCATC GCCCCGACCCGCGAACTGGTGGTACAGATCGCCAAGGACGCCGCGGCGCTGACCAAGTACACCGGGCTGAACGTGATGACCTTCGTCGGCGGCATGGACT TCGACAAGCAACTCAAGCAGCTGGAAGCGCGCTTCTGCGACATCCTGGTAGCCACCCCAGGCCGTCTGCTGGACTTCAACCAGCGCGGCGAGGTGCACCT GGACATGGTCGAGGTGATGGTCCTCGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCCCGCAGGTCCGGCAGATCATCCGGCAGACCCCGCACAAG GGCGAACGCCAGACCCTGCTGTTCTCGGCGACCTTCACCGACGACGTGATGAACCTCGCCAAGCAGTGGACCGTCGATCCGGCGATCGTCGAGATCGAGC CGGAGAACGTCGCCAGCGACACCGTCGAGCAGCATGTCTACGCCGTGGCCGGCAGCGACAAGTACAAGCTGCTGTACAACCTGGTGGCACAGAACAACTG GGAACGGGTGATGGTCTTCGCCAACCGCAAGGACGAAGTCCGCCGCATCGAGGAACGCCTGACCAAGGACGGCATCAGCGCCGCCCAGATGTCCGGCGAC GTACCGCAGCACAAGCGCATCCGCACCCTGGAAGGCTTCCGCGAAGGCAAAATCCGCGTCCTGGTGGCAACCGACGTGGCCGGCCGCGGCATCCACATCG ACGGCATCAGCCATGTGATCAACTTCACCCTGCCGGAAGACCCGGACGACTACGTGCACCGTATCGGTCGTACCGGCCGCGCCGGCGCCTCGGGCACCTC GATCAGCTTCGCCGGCGAGGACGATGCCTTCGCCCTGCCGCCGATCGAAGAACTGCTGGGCCGCAAGATCACCTGCGAGATGCCGCCGGCCGAACTGCTC AAGCCGGTACCGCGCAAGCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGCAGGCATGGAGAAAAAAGGCGAAGCCATCCGGCTTCGCCTTTTTCGTTTCTGCGACACGCAGGTGCCGCCGTCGGTCATCGAGGCAGGTCGGCGCTT GCCCGGCAATACCTTAAAGTCCAGAATGGACAAATTGTTTACATCCATTCCGGAGATCGCATGAGCGCCGCCACTCCCCTGATCGTCCAGCAGGCCGAAG CCGAGCAACTGCTCGCCCGTATCGACGTCCTCCAGGCCATGCGCCAGCTGTTCCTCGACCTGGCCGCCGGCCAGGCGCTCCAGCCGGCCCAGCAACTGGT GGAGTTCCCCGCCGGTCGCGGCGACTTCATCAACTACCTCGGCGTGCTCGCCCAGGAACAGGTCTACGGAGTCAAGACTTCGCCCTACATCGTTCGCGAA CAGGGCCCGTTGGTCACCGCCTGGACCCTGCTGATGTCGATGCAGACCGGCCAGCCCTTGCTGCTCTGCGATGCCGCCCGGCTGACCACCGCGCGCACCG
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| Amino Acid Sequence |
>RNA helicase
MLKALKKIFGKADGTQPQSGSSPVPQGPAGATAKGTAPTGEKPTEKRPRKPRPARADNESGAPRAAEKAEKGEKPAKPAGKEGRDAKPRSDKPRRERKPK PVDNWKLEDFVVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALII APTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHK GERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGD VPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELL KPVPRKH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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