Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_30, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACCAGGCCGCCGGCGACGCCCAGCAACAGAGCAACGTTCGTGTCGTCGCGGTAGGCTCCGCGGCCCTCGTCGGCAGCGACCAGCGCCAGCATCTGCAAC TCGACGCCAGCCAGCCGATCGCAGCCAGCGCCAGCATCTCGGGGGCGGCGCTGCGCGGCAGCGGCATCCTCGGCGTCAACCAGGGCGCCGGCCTCGGCAA CCAACAGATCAACGCCTTCCGGCTGAGTCTCAGCAACGGCCCGGAAAGCCTGGATGACAGCGTTCTCGCGCAAAGCGTGGCGCTGACCAAAGTCTCCGGT TCGGCCACTCCGGTCCCGGGGGGACGCAGCGTCTCGACGGACGATCGCGCCTTCGCCGGGAGCAGCGGCGTGGTGCAGGTGAACCAGAGCGCTGGGGTGG GCAATCAGTCGATGAACACCCTCAGCGTCAGGGTCATGGAATGACTCTGCCAAGCCAACACAAGCCCAACACTAAGCACAGAAATGCAAGGAGAAACGCC
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DNA Sequence for Gene |
>NQ02_RS24860
ATGAAAGCGACTATGGTCCTGACCCCGCTGGCCCTGGCAATGGCTGCAGTGCTGTCGGTATCGGCCTACGCCGGAAACGAAGGTGGCTGGCACCCGCCGA AACCCAACCCGCAGTCGAACAACAAGGGCGGAGCCACGGCCCTGGTGGTGGATACGCAGCAGAACTACAACAACAAGGTCAGCAACTTCGGCACGCTGAA CAATGCCTCGGTGAGCGGCTCGATCAAGGATGCCTCGGGCAACGTCGGGGTCAACGTCGCCGCCGGCGACAACAACCAGCAGGCCAACGCCGCCGCGCTG GCCAGCGCCGACGCCAGCTTCGTGTTCGGCACCGCGACCGCCAGCACCAGCGTGCTGCAGAGCGGCTACGGCAATACGCTGAACAACTACTCCAACCCCA ACACCGCATCGCTGAGCAACTCGGCCAACAACGTCTCGGGCAACCTGGGCGTGAACGTCGCCGCCGGCAACTTCAACCAGCAGAAGAACGACCTGGCCGC CGCCGTCTCCAACGGCCAGTACAGCACTGCCGGTAGCGCCGCGTCGCAGACCTCCACCGGCAACACCACCGTCAACAGCGCCAACTACGCCTATGGCGGC ACCTACGTGTCGCTGAAGCTGAACGCCGACGGCAGCTACAAGGGCACCTCCGACCAGATCGGCGACGTCTACCTCGACACCTGGGAAGGCCAGACCCATC CGGGCGGCAGCAATACCGGCCACATCGACGTGGACAGCCAGGCCCAGGGCGCCAAGGACCTGAACCACGACGGCGGCGCGTTCGCCTTCAAGGAAAAGGG CGACGTCGACCTGAAAGGCACGGTGTCCGGCTTCATCCCGGCGATCGTCGGCTTCAAGACCCCGGTCACCAACAACGCCAGCCTGAGCAACTCGTTGCAG AACGTCTCGGGCAACGTCGGGGTGAACATCGCCGCCGGTGGCGGCAACCAGCAGAGCAACTCCCTGTCCATCGCCGCCGGTTGCAGCAGCTGCCCGGCCG GTGGCGAGAGCCTTGGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCTGGCCCAGGGGTTCCGGCGCCAGCCGGAACCCTTTTCCACCCGACACAGGAACCGGCCATGCGCACGCTCATCCTTTCCCTGCTGCTGCTCGTCGAC CTCACCGCCCAGGCGGCGACCCTCGGCTTTCCCGCCCTGCCCGGCGGCGGCCTGGTCTACAAGCAGGTGCAGAGCATCCGCGAGCGGCGCTTCGCCGACC TGGTCGAGCAGAAGACCGATTTCAGCTGCGGCGCCGCGGCCCTCGCGACCATCCTGGAGAAGGCCTACGGCGCCCCGCTCGACGAGCAGGCGGTGATCCA GGGCATGCTCGCCCACGCCGACCCGGAGATCGTCCGCACCCAGGGCTTCTCCATGCTCGACATGAAGCGCTACGTCGAATCCATGGGCATGCGCGCGCGC GGCTACCGGATCGAGGCGGCGCAACTGGAACAACTGAAGATCCCCGCCATCGTGCTGATGGAAATCCGCGGCTACAAGCACTTCGTCGTCCTGCAACGCA
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Amino Acid Sequence |
>hypothetical protein
MKATMVLTPLALAMAAVLSVSAYAGNEGGWHPPKPNPQSNNKGGATALVVDTQQNYNNKVSNFGTLNNASVSGSIKDASGNVGVNVAAGDNNQQANAAAL ASADASFVFGTATASTSVLQSGYGNTLNNYSNPNTASLSNSANNVSGNLGVNVAAGNFNQQKNDLAAAVSNGQYSTAGSAASQTSTGNTTVNSANYAYGG TYVSLKLNADGSYKGTSDQIGDVYLDTWEGQTHPGGSNTGHIDVDSQAQGAKDLNHDGGAFAFKEKGDVDLKGTVSGFIPAIVGFKTPVTNNASLSNSLQ NVSGNVGVNIAAGGGNQQSNSLSIAAGCSSCPAGGESLGF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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