Pseudomonas aeruginosa AZPAE12140, NQ02_RS24710

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_30, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCCGTTCGGTCCAGCCTGGATCGGTGAGGTCGCACTCCACCACGCGGACCCGCTCGGCGAAACCGGCCAGCGCCGTACGCGCGATCTCCAGCAGCATG ACGTCGGCGTCCAGCGCCACCACCCGCGCCGCCGGGAAGCGTTCGAGCAGGCGCCGGCCGAGGGAGCCCGGGCCGCAGGCGGCGTCGATGGCGGTGAAGC GCCCGTCGCGGCCGAAGAGGTCTTCGAGCAACTGGAACATCGCCTCGTAGCGCTCCTCGCGCTGGCGGATGTAGCCCTCCTGCTGGCGGTCCCAGCGTTC GAGGAGCGCCATGATCTGCTCGGTTGCGGTCATCTTTCCTCCAGGGGGGCATGCCCGGTTGAGAGTGGGGTCCTGTGCTTCGAGGGATACGGCGAGCGAG ACGTTCCCTCGCCTCGATGAAGAAGAAACGGCGGGCATTCTTCATTCGAAGAAATGTTATGTTATAACTTATAAATATTCATAATTCATACCTGCCGACC
DNA Sequence for Gene
>NQ02_RS24710
ATGACCCCCCATTCCTCCCCGCACCGTCTTCCTCCGCTGCGGCTGGCCCGCGCCGTGCCGTTCCTCTACCTGCTTCCCTGCCTGGCGCTGGCCGCGCCGG TCGACCTGGAGCCGACCGTGGTCAGCGCCACCACTACCGAGCGCAAGCTGCGCGACGCCCCGGCCAGCGTTTCGCTGATCGCCGTCGAGGACCTGCGGCG GCGCCCGGTGCGCGACCTGCAGGAAGCCCTGCGCGGTTCGGAAAGCCTGCAGTTCAACGGCGTCGGCATGTCCCGGCGGGGCATCAGCGTTCGCGGCATG TCCAGCGAGCACACCCTGGTGCTGGTGGACGGCCAGCGGATCTCCACCTCGTCCGGGGCCATCGCCCATTCCGACTTCGACCTCGGCTGGGTGCCGGTGG AGAGCATCGAGCGTATCGAGGTGGTACGCGGACCGATGTCCTCGCTCTACGGTTCGGAAGCCCTCGGCGGGGTGGTGAACGTGATCACCCGGCGCGCCAC CGATACCTGGACGGGCAGCGGTCTGCTCGATGGCGGCGTGCGCGAGGACGGCCTCGGCGGGCAGAGCCACCAGCTCGGCGCCTATCTCGCCGGGCCGCTG GTGCCCGGCAAGCTGGGCCTCGCCCTGAACGGCGAGAGCCGCCGCCAGCAGGAAACCCCGGACGCCGATGAGCGCCGACTCTCCGAGCTGGAAGGCGGCA ACGCCGACAGCGGTGGGCTGAACCTCAGCTGGACCCCGGACGACGCCCAGCGCATCGACCTCGGCCACCAGCGCGGGCGCGAACGACGCTGGCGCAACAG CGAGACCGGAGGGCCGCGCTCGCGCTACTACGAGTCGCGCGACGTGATCGAACGCGAGCGCTGGTCGCTCGCCCACAATGGCCAGTGGGACTGGGGCAGC AGCCAGCTGCGCACCTACCGCAACCGCCTGGAGCGGCACAACGCGCGTTCCGACGGACAACCGCCGAGCAACCCGCAGCGGCTTACCGACAGCGTGGTCG ACGGCCACCTCAGCGTGCCGGCCTTCGAGCGACATCTCTTCACCCTCGGCGGCGAATGGCGCAAGGAAGAACTGGAGGATCGCTCGGTGAATACCGCCGG CGACGCCAGCGCGCGACACAAGGCGCTGTTCCTGCAGGACGAGATCGCCTTCGGCCCGGACTGGTCGCTGACCCTCGGCAGCCGCTTCGACAAGCACGAG GCGTTCGGCTGGGAAAGCAGTCCGCGCCTGTACCTGCTGCACCACCTTTCCGATGCGCTGACCCTGCGCGCCGGCGTCGGCCGCGGCTACAAGGCGCCGA GCCTGAAGCAGCTATCGCCGGAGTATGCGGCGGTCGGTGGCGGCGGGCGCTTCACCATCTACGGCAATCCCGACCTGAAGCCGGAGACCAATACGTCCTA CGAACTGGGCGCCGACTACCAGGGCGATGGCTGGTCGCTGAAGGGCACGGTGTTCGAGAACGATGTCCGCGACCTGATCCAGACCGTCTGCGTAGCGCGC TGCGGGGTGCGCGGCGGCGAGATACGCAACTACGAGAACGTCGACAGGGCACGGATCCGCGGCCTCGAGCTGGGCGGCGGCGTGGACCTGCCGGCGGACC TGCGCTGGGAACTCAACTACACCTACCTCGACGCGCGCAACCGCACCGCCGGCCAGCGCCTCGGCGATCGCTCCCGGCACCTCGCCAACAGCCAATTGCG CTGGAGCCCCAATGCCCGCTTCAGCGCCCAGTTGCGCACCGAATACGTCGGCAGCCAGGTGGCCTACAGCAGCAACGTCGGCTATGCCTTGCCGGCCTAC AGCCTTTGGCACCTGGAGCTGAGCCAGAAACTCAGCGAGAACCTGACGCTGCGCGGCGGCATCGAGAACCTTGGCGACCAGCGCCTGGCCGACGACGACA CGCACTTCACCTATGCCGAACCTGGGCGGACTTTCCATCTCGGTCTGGTGGCGAGCTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCGCCGTTCGCTACTCTTCTGCGGCGCGCTGCTGGCCAGTCTCTGTGCCTGGGCGGAGCCGGCCCAGGTGCGTCTGCTCAGCAGCGATTTCGTCCTCCC GGGCAAGCACCAGCGCCTAGCCGGTTGGGCGCGCGAGGCCGGTGTCGAGTTGCGCGGCCTGCGCCTCGGCATCGGCGAGGCGCCGCCCGGCGAGTGGCTG GACGGCGGCGACCTGCTGATCCTCGACACGCCGCGGCCGACCGATCGCGCCCAGGTCGAGGAGGCGCTGGGCGAGCGCTTGCAAGGCGGGACGCAACCCT GGATCCGCGTCGGCGGCGGTCCGCCGGGTTTCGGCAACCTGCCGGCGGCGCTGGGCGGGCGCCTGGTCGGCTACTACGCGAACGGCGGCGAAGCCAACCT GCGCCGGCTGTTCGAGGCGGTCCGACGCTGGCATGCCGGCCTGCCCGTCGACGCGTTGCCGGCGCCGCAGCCCCTGGCGCAGGCCGGCTTCTATCATCCC
Amino Acid Sequence
>TonB-dependent receptor
MTPHSSPHRLPPLRLARAVPFLYLLPCLALAAPVDLEPTVVSATTTERKLRDAPASVSLIAVEDLRRRPVRDLQEALRGSESLQFNGVGMSRRGISVRGM SSEHTLVLVDGQRISTSSGAIAHSDFDLGWVPVESIERIEVVRGPMSSLYGSEALGGVVNVITRRATDTWTGSGLLDGGVREDGLGGQSHQLGAYLAGPL VPGKLGLALNGESRRQQETPDADERRLSELEGGNADSGGLNLSWTPDDAQRIDLGHQRGRERRWRNSETGGPRSRYYESRDVIERERWSLAHNGQWDWGS SQLRTYRNRLERHNARSDGQPPSNPQRLTDSVVDGHLSVPAFERHLFTLGGEWRKEELEDRSVNTAGDASARHKALFLQDEIAFGPDWSLTLGSRFDKHE AFGWESSPRLYLLHHLSDALTLRAGVGRGYKAPSLKQLSPEYAAVGGGGRFTIYGNPDLKPETNTSYELGADYQGDGWSLKGTVFENDVRDLIQTVCVAR CGVRGGEIRNYENVDRARIRGLELGGGVDLPADLRWELNYTYLDARNRTAGQRLGDRSRHLANSQLRWSPNARFSAQLRTEYVGSQVAYSSNVGYALPAY SLWHLELSQKLSENLTLRGGIENLGDQRLADDDTHFTYAEPGRTFHLGLVASF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site