Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACTTCTCGGGCAACATCACCGACGTCGCGTGCGATATCAACGGCCAGGCGCCGGGTGCGGGCAACGTCACCAACGTCGACCTGGGTATCGTGGCGCCGAC CCATTTCACCGCCGTCGGAACCAACTCCACTTTCCAGGAGTTCGACCTGGTCCTCTCCGGTGCCGGCTGCACCAATGACAAGAAGGTTTCCATCGCCTTC GATCCGGTCACCAACGTCGACCGTATCAGCGGCAACCTGATGCTGATGGGGCCGTCGGAAGCCAAGGGCGTGCAGATCCAGATCTTCAACAATTCGGCGG CCAACACCACGAAGATCCCGCTGGGCTCGGTCGAGGCCGCCCCGCAGAAGGCAACCGTCCTGAAGAACACGGCGACCCTGAAGTACAAGGCCTCCTATGT GTCCACCGAGAAGACCGTGACCGCGGGTACCGGCCTGTCCCATATCCGCTACCTCCTGGCGTACGAGTAAGCGGCGGTCGACGGACGAAGAGGTGAGGCC
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DNA Sequence for Gene |
>NQ02_RS02965
ATGGCGCCGCTAATGCATCGTTTTCATTCTTTCGTGGCGGCAAGCGCCGTGGCCATCGCCCTGTGCGTCGGAACGGCTCACGCCGGGCTGATCGCACAGG GCACTCGCGTCGTCTTTCCGGCCAGCGAGCGCGAGGTCACCTTGCGGGTCAGCAATACCTCCGGCACTCCCGTGCTGGCGCAAGCCTGGATCGACGATGG CCGGCAGGACGTTCCCCCCGAGGAACTGCAGGTTCCCTTCAGTGTCACGCCGGCCGTGACGCGAGTGGACCCCAATGGCGGCGCCGTATTGCGCATCGCC TACCTGAAGGCCCCGTTGCCGACGGATCGCGAATCGCTGTTCTGGCTGAATATCCTGGAAGTTCCGCCCAGGGACGAAGACGAAAACAATGCATTGCAGT TTTCCTTTCGTTCGCGCTTCAAACTCTTCTTTCGACCCAGCCAGTTGAAGAGTGTCGATTCGGCTGCCGGGAAACTTCAATGGAAGTTTCTGGAGTCAGG GGGAGCAGGAAAAAAGACCGTAGTACAGGTAAATAATCCGACGCCTTACTACGTTTCGTTCGCCAGCGTCGAATTGATTGTCGATGGCCGTGTCATGTCC GTGGGAAAGGGAATGGTCGCGCCATTCTCGACGAAGGAGTTCGACTGGCAGGGAAATCCGAAGAACCTGGAAGCCGCTTCCGTCAGATACGAAGTCATCA ACGATTACGGTGGCCGCAATACCCTCGATAGGGCACTCGGCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCCCTCCGTTTCCCCGCTTTCTACTTACGGCCCGACATATGAGTGGCGATTTTAAAATCGCTGCAGGGATTACATATGCCCAAAGTTTCTCTTCATAGGT GCCTGTCCGCTCCCGCTTACGGTGGGCAGGTCGCCCTGTTGCGAATGGCGATGCAGGGAGGGATCGCCGTTCGTTCCCTGCGATTCGCCTGTCTGCTGGC ACTGTTTCCTTCGCTGTCCTCCTGCCAGTCCTGGTCCTCCGTCGGCGCCGCCGGCGTAGCCGGGGCGAAGGCGAAGGAGGCCAGGACGGGAGCACCGGCG AAACAGCCGCAGGCGCCCGCGGCGGCCGTTGCGTCACCGGCCGGTGGGTTGGACGCACCGTCGCGGCGGATCGTCTTCGACGCGCAGATGCTGGCCCTGG GGCCGGGCGGACGCTCGATCGATACGTCGCGTTTCGAGCGCGGCGACGTCATCGAGCCAGGCCGCTATCGCCTCGACCTGCTGCTCAACAGCCGATGGCG
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Amino Acid Sequence |
>molecular chaperone
MAPLMHRFHSFVAASAVAIALCVGTAHAGLIAQGTRVVFPASEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVDPNGGAVLRIA YLKAPLPTDRESLFWLNILEVPPRDEDENNALQFSFRSRFKLFFRPSQLKSVDSAAGKLQWKFLESGGAGKKTVVQVNNPTPYYVSFASVELIVDGRVMS VGKGMVAPFSTKEFDWQGNPKNLEAASVRYEVINDYGGRNTLDRALGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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