Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_16, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGAAGCTCGACGTGACCTACCGCATGGCCTGGTTCCGCGGCCTGAAGACCACCTACTACCTCCGTGCCCTGGCCGCCACCAGCACCGAGAAGTCCACCA TCAACACCGGCAAGCTCAACGCCGTGTCGGCCGGTGGCAACGACGGCCTGCAAGCCGCCCCGGCCGCCGAGCCGAAGCCGGCGCCGGTGCCGCAGGCATG CAGCATCGACAACCCCGACTGCGAAGCCTGCCAGTGATCGCGCGTCGCTGAACGGCGTCCGTGTCGCGGCCGGGCAAGCCGGACTCCCCCTGTGAGTCCG GCCTGTCCGGCGCCTGACGGTCGCTCGTCCAGCGCCACGCTGGCAGCGCAAGGCCCCTCGCCAGGGCCAGGAACAATCCCCTTCTTCCCTCCGGGGGAGA AGAACGGCCCGGCCAGACCGTGCCGGACCACCGCTTTCGCGTGCACCTCACGCCCCATATCCAGGCCGCCGAGACGGCCGCCAGACCAGGAGAGAGCAAG
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DNA Sequence for Gene |
>NQ02_RS16625
ATGCTGAGCTGGGACGAATTCGACAAAGAAGACCCGACCGAAGCCAAGGCCGCGCCCGCCGCCGCCCAGGCCGTTGCCCAGGGCCATGACAAGCTGGACG ACGAAGCCGCCGGCTCGGTGGAAGAAGCGCGCGCCGTTTCCGCCGACGACTCCGACGCTGTCGCCCGCGCCAAGAAGGCCCTGAACGACCTCGACATCCA GGAAGGCCTGGACGACCTCGAAGGCTCCGCCGCGCGCGTGCAGGTCGGCGACAAGCAGATGATCAACGCCCGCGCCGACCTCAACCAGCTCGTCCCCTTC AAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCGCAGGAAGTCAACATGAACGCCGACATCGCCCTGTGGAAGAGCA AGGACGGCCTCAGCGAAGACGAGCGGCGCATCGTCATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTCGCCAACAACCTGGTGCTGGCCGT GTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAGTCG CTGGGCATGGACGAGGGCGAGATCTTCAACATGTACCACGAGATCCCCAGCGTGGCGAAGAAGGCCTCGTGGGGCCTGAAGTACACCCGCTCGATCTCCG ACCCGATGTTCCAGACCGGCACCCCGGAAACCGACCGCCAGTTCCTGCGCAACCTGATCGCCTACTACTGCGTGCTGGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCCGAGCAGTTCCAGTACATCCTCCGCGACGAGTCGATGCACCTGAACTTC GGTATCGACGTGATCAACCAGATCAAGATCGAGAACCCGCACCTGTGGGACGCCCAGATGAAGGACGAGGCGACCCAGATGATCCTCCAGGGCACCCAGC TGGAGATCGAATACGCGCGCGACACCATGCCGCGCGGGGTGCTGGGCATGAACGCGGCGATGATGGAGGACTACCTGAAGTTCATCGCCAACCGGCGCCT GACCCAGATCGGCCTGAAGGAGGAGTATCCGGGGACCACCAACCCGTTCCCGTGGATGTCGGAGATCATGGACCTGAAGAAGGAGAAGAACTTCTTCGAG ACGCGGGTTATCGAGTACCAGACGGGGGGGGCCTTGAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGATGGTGTAAAAGGTCGAGACCATTAGTAGCGCTGTGCCACCACATGGATTGTTGGGGAAGCGATAGAAAGACCGAAGCCCCGCCTTGTGCGGGGTTTT TTATTGGAGAAAGAAATGCGACCACAAATTGAGTTCCGACACGTCCTTAGTGAATTATCCGTCAATAGAAATGATCCATGCGAAGTTCTTCGCGAGCTTA TCTCAAACTCATACGATGCAGACGCTAAGAATTTATTTTATGCACCACTAAAGTCTGAAAAAGGTTTTATATTTTTTGACGATGGAACAGGCCTTGACAC TGAAAAGAAGACAAATGGAGTAACTCCATACGAAGCATTTTTCTCCATAGGAAAGTCAACAAAGAAAAAAGGAGAAGCTATTGGATACAAATGCCAAGGC TCCAAGCTTTGCTTCGCCTGCGCTCGCATACTCATTGCAACAAAGTTTGGTAAAAAAAATACAGAATGGCATTTCAAGTCCGTCGAAAACCCTAGAAAAA
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Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDPTEAKAAPAAAQAVAQGHDKLDDEAAGSVEEARAVSADDSDAVARAKKALNDLDIQEGLDDLEGSAARVQVGDKQMINARADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPMFQTGTPETDRQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAQMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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