Pseudomonas aeruginosa AZPAE12140, NQ02_RS16105
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCTGGGTGGCGGCCGAGGGCTTCTCGCAGACCGCCCGCCGCGCCGAGGTCGGCGCGGCCAGCCCGGCGAGGTTGAACAGGTGGTGGGTTTCCGTCTCG TTGCACAGCAGGGCCCGGGCGATGGCTCCGATCACCTGCTCCGAGGCGCGTACCGCGCGGCCCTGCTCCAGCCAGGTGTACCAGGTCACGCCGACCCCGG CGAGCTGCGCCACCTCCTCGCGACGCAGGCCCGGCGTGCGTCGGCGGCCGAGGCGGGAAATGCCGACCCGCTGCGGCTCGATGCTTTCCCGCCGGCGGCG CAGGAAGGCCCCCAGCTGTTCGGCGCGGGACGGCTGCGCGGGGCTTTCCGCAGAGTGGCTGGCAGGGGCGTCGAGTGGCATGGCGAAGTCCTCCGGAGGG CAGACGGGTAGCGCCAATACCAGGATAAGCAAGAACTGGTACCGGGTTAGCCAGAAGCGCATGCTGCCAGCCCACTCCCTTCCGCACAAGGACTCCGCCC
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| DNA Sequence for Gene |
>NQ02_RS16105
ATGCCCAGCACCGTCTCGTCGTCGCGGCTCGGCCTCGCCGGGCTCTGCATCCTGCTGGCGGGGCAACTGTTGCCGATGATCGATTTCTCCATCGTCAACG TCGCCCTCGACGCCCTCGCCCATTCCCTCGGCGCCAGCGAAACCGAACTGGAACTGATCGTCGCCGTCTACGGCGTGGCCTTCGCCGTGTGCCTGGCGAT GGGCGGCCGGCTTGGCGACAACTACGGCCGTCGCCGCCTGTTCGATCTCGGCGTCGCCCTGTTCGCCGTCGCCTCGTTGCTTTGCGGGCTGGCCGGTTCG GTCTGGCTGCTGTTGGTGGCGCGCGCCCTACAGGGCGTCGGCGCGGCGCTGGTCGTGCCGCAGATTCTCGCCACCCTGCATGTCAGCCTCAGCGGCCACG CGCATTCCCGCGCGCTAGCCGCCTACGGCGCCATCGGCGGCCTGGCCTTCGTCGTCGGCCAGGTGCTCGGCGGCTTCCTGGTCTCCGCCGACATCGGCGG CCTCGGCTGGCGCAGCGTGTTCCTGATCAACCTGCCGATCTGCCTCGGCATTCTCCTTTGCAGCCGCCGCTGGGTACCGGAGACCCGCGCCGAGCATGCC GCCCACGTCGACGCGCCGGGCACCCTGCTGCTCGCCGCGCTGATCCTCTGCCTGCTGCTGCCGCTGGCTCTCGGCCCATCGCTGCACTGGTCCTGGCCCT GCGCCCTGCTGTTGGCGGCGGCGGTGCCGCTGCTGGCCTGGCTGTGGCGCACCGAGCTGCGCCAGGAACGCCGCCAGGCCTGGCCGTTGCTGCCGCCGTC GCTGCTGCGCCTGCCGAGCATCCGCTTCGGCCTGTTGCTGGCGATCCTGTTCTTCGCCTGCTGGAGCGGCTTCATGTTCGCCCTCGCCCTGGCCCTGCAG GCCGGCGCCGGTCTCTCGCCGGTACAGGCCGGCAATGCCTTCATCGCCCTCGGCGCCTCCTACTTCGTCTCGGCGCTGCTCACCGCCCGGGTGGCGGCGC GGATCGGCCCGGTACGCCTGCTGCTGCTCGGCTGCGTCATCCAGATGTGCGGCCTGCTCGGCCTGATGCTGACCCTGCAACGGGTCTGGCCGCAGCCGGG CATCCTCAACCTGGCGCCGGCGACCCTGGTGATCGGCTTCGGCCAGGCGTTCATCGTCAGCAGCTTCTTCCGCATCGGCCTCTCGGAGGTGCCGGCCGCC CAGGCCGGCGCCGGCAGCGCCATGCTCGCCACCGTCCAGCAGGCCTCCCTCGGCCTCGGCTCGGCGCTGCTCGGCGCGGTGTTCGCGCACAGGCTGGAGC GCCATGGCGACTACCTGGAAGCGACGCAGACGACCCTGGCCGTCGAGTTCGTCCTGATGACGCTGCTGCTCGGCGCCACCTGCCTCTTCTACCTGCGCCG CGTGCGCACGGTGCCATTGCGCTGCGACTCGCCGGGCAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGCGCGGCCGGGCCCTGTTCCCGGCCGCCGGCGCCCCGTATGCTGGCGCGGTCCCCCAGCCAGGCCTTCGCCCCGATGCACGACCTGCTCGCCGCCCC GCCCCCCGCCGACCTCGCCAGCCTGCTGGCCAGCCTGCGCCAGGTCGAGGCGCTGCTCGACGCCATGCCCGGCGTGGTGTTCTTCGTCAAGGACGAGCGC GCCCGCTACGTCCTGGTCAACCGCACCCTGGCACGCCGCTGCGGCGTGAAGGACAAGGCCGAACTGCTCGGCCGCAGCGCCGACGAGGTCTTCCCTTCCA GCCTCGGTCCGCTCTATGCCGAGCAGGATCGGCGCGTGCTGCGCGGCGGCGCGACGCTGGAGAACCAGTTGGAGCTGCACCTCTATCCCGGTCGCCAGCC GGGCTGGTGCCTGACCCACAAGCAGGCGCTGCGCGATGCCGACGGGGCGATCATCGGCATGGCCGGCATCTCCCACGACCTGCCGGCGGCGCAGTCGGCG
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| Amino Acid Sequence |
>MFS family transporter
MPSTVSSSRLGLAGLCILLAGQLLPMIDFSIVNVALDALAHSLGASETELELIVAVYGVAFAVCLAMGGRLGDNYGRRRLFDLGVALFAVASLLCGLAGS VWLLLVARALQGVGAALVVPQILATLHVSLSGHAHSRALAAYGAIGGLAFVVGQVLGGFLVSADIGGLGWRSVFLINLPICLGILLCSRRWVPETRAEHA AHVDAPGTLLLAALILCLLLPLALGPSLHWSWPCALLLAAAVPLLAWLWRTELRQERRQAWPLLPPSLLRLPSIRFGLLLAILFFACWSGFMFALALALQ AGAGLSPVQAGNAFIALGASYFVSALLTARVAARIGPVRLLLLGCVIQMCGLLGLMLTLQRVWPQPGILNLAPATLVIGFGQAFIVSSFFRIGLSEVPAA QAGAGSAMLATVQQASLGLGSALLGAVFAHRLERHGDYLEATQTTLAVEFVLMTLLLGATCLFYLRRVRTVPLRCDSPGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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