Pseudomonas aeruginosa AZPAE12140, NQ02_RS15795
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTCTACATCCTCGCCTTCATGGCGGCGACCCTCGCCTTGTGCCTGGGCGGCTACGCCGGCTACGGCTACCTGCTGGTGGCGGTGGCGGTGAGCCTGTGG TGGCTGGCCATCGCCCTGACCGGCTACTGGACCGCCGACGACCGGGTCTGGGCGCGCAAGCTGTTCGCCTTCTCCATCGTCGCCATCACCGCGCTGAGCG TGATGATGTCCATCGACTTCCAGGTGGCGCCCGCCACCCATCTGGTCGCCTCGCTGTTCTGAGGCGACACGCTTTAGGGAAAGCCCCGCCGGTCGATTGG CGGGGCTTTTTTTTGTCTGCGCGATGGCAGGGATGCGGACGCCGCCTGGCAGAAGGGCCGCGCGGCGAGCCCTCTGTTCCGGGACTCTGCCGTTGGTTAT CAGATTTTTCCGGGAGCTTTTTCGGAGCTGTCCGGCTTGTGAAAAAAACCCTCCATCAATCAAATGCCAATGATTCTCAATAACCAAGATGGAGTACTTC
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| DNA Sequence for Gene |
>NQ02_RS15795
ATGGATCGTCGCAACGAGCCGTCCCCCTTGCCCACCAAACGCCCGCTGGCGCCGCTGATGCTGTTGATGGCCGCCTGCTCCTCGCCGGCCCTGGCCGAGG ACGCGGCGCGCAAGGACGATCCCCTGGAACTGGGAGCCGACACGGTCACCGGCGAGCAGGCCTCGTCCAGGGTCGAACGCTCGGCCTCGGCCAAGTACGC CGTGCTGCTGCTGGATACCCCGCAGACCGTCACGGTGGTGCCGCAAAAGGTGATCCAGGAGCAGAACGCCCTGAGCCTGCGCCAGGTGCTGTCCAACGTC TCCGGCATCACCTTCAACGCCGGCGAGGGCGGCGGCGGTTCCGGCGACAGCATCAACATCCGCGGCTTCAGCGCCAACGCCAACATGCAGGTGGACGGGC TGCGCGACAGCGCCCAGACCAGCCGCAGCGACCTGTTCAACCTGGAGGCGGTGGAAGTGATCAAGGGACCGAACTCGGTGTTCGGCGGCGCCGGCACCAG CGGCGGCAGCATCAACATGGTCAGCAAGCAGCCCAAGGCCGAAGCCTTCACCCACCTGGGCGCCGGGCTGGGCACGGACCGCTACCGGCGCCTGACCCTG GACACCAACCAGCCGCTGGAAGGGCTTGGCGAATCGACCGCCTTCCGCCTCAACCTCATGGCCCACCACAACGACGTCGCCGGGCGCGAACAGATCGACA AGCAGCGCTGGGGCATCGCGCCATCCCTGACCTTCGGCCTGGACACCCCGACCCGCCTGACCCTGAGCTACTTCCACCAGCGCGACGACAACCTTCCCGA CTATGGCGTGCCGGCGCTGAACGGGCGCAAGCTGGACGGCGTCAGCCGCCACGATTATTTCGGCTGGCGCAACCTGGACGAGGAACGGATCGACAACGAC GTCGCCACCCTCAAGCTCGAACACGATTTCAGCGACGACTTCCAGTTGCAGAACCTCATCCGCTATTCCCACCTGCATCGGGACACGGTGATCTCCGCCT CCCACGTCAACCAGAAGGGCCTGCCGCCGGGTCGCTACCTGCCGGCGGGACCGCAAGCCTACGGGCGCGATTCGAAGACGCGGATGTGGATCAACCAGAC CAACCTCACCGGCCGCTTCGATACCTTCGGCCTGGCGCATACGCTGATCGGCGGCTTCGAGCTGTCCCGCGAGACCTACGACCGCACCACCTACTCCTAC AACCTGGGCAAGTTCTACCCGGCCAACGGCTTCGACCTGCACAACCCGCCGGGCTACTGGAACGGCCCCACCGACAAGCGCGACAGCGCGCGCAACCGGA CCGAACTGGAGGTCAAGGCGCTGTACGCCTTCGACACCATCGCCCTGGACGAGCGCTGGGACCTCAGCCTGGGCCTGCGCTACGACTGGATCGACGGCAC CTCGCGGAGCACGCCCTCAGGCAAGCCGACGGTGCGCGCCGACAGTTCCGACAGCAAGCTGAGCACACGGGCGGGGCTGGTATTCAAGCCGCTGGAGAAC GGGCGGGTGTACTTCTCCTACGGCACCTCCTTCAACCCCTCGGCGGAACACCTGGTCACCACCGGCTCGGGCGTGACCGAGGCGACCGGAGGCCTGGCGC CGGAGAAGAACAGCACCTACGAGCTGGGCACCAAGTGGGAGTTCCTCGGACGGCGCCTGGAGCTGGACGCGGCGCTGTTCCAGGTGAAGAAGGAGGACGC TCGCGAACGCCTGGCCGACGGCAGCTACGTGCTTGCCGGCGAACAGCGCGTGCGTGGCCTGGAGCTGAGCGCCAGCGGCAAGCTGAACGAGCACTGGGAC CTCTTCGCCACCTACACCTACCTCGACAGCGAAACCCTGAAATCCAGCAACCCGCAGCGTGAGGGACAGGCCCTGGGCAATACCCCGCCGCGCTCGTTGA GCCTCTGGAGCACCTACGAACTGCCCGAGGGCGTGACCCTGGGCTATGGCGCACGCTACGTCAGCCAGCGCAACGTCACCTCGGTGGACAACGGCAAGCT GGATGCCTACTGGGTGCACAACATGATGCTCGGCTACCAGGCGACGCGCGACCTGAAACTGCAACTCAACCTCGACAACCTGTTCGACAAGGCCTACGTC GAGCGGGTGCGCCAGGTGTACGGCAACCAGTCGCGCTCCTCGGCCATCGAGTATGGCGACGGTCGCACGGCGATTCTTTCGGCGATCTACGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGGCAGGCAGGCCATGGAAGCCGGCGCCCACTGCCTGGGCGCCGGTTCTTCCCGGCGATTTCCTCTGAACTTTTTCACTGCGGCGCCTATCAACTCCTTT GCAAGTCATTTTTCAGGGAGCCTCTTCGATGGCACGCAAGAACGCAGTGAAAGACAACCTCGAGCAGATTCAGCACCAGAGCTACAGCGAGCTGCAGGAA CTGCTCTCCGAAGCCAACAGCATGCTCGCCGACAGCGCCGCTTTCGCCGGCGACAAGGCCGACAGCGCCCGTGCGCGGATCGGCGCGCTGCTGGAGAAGG CCAACGATGCCCTCGGCAAGGGCGGTAGCGCCGTGGCCGAACGCAGCCGCCACGCGGTGGATGCGACGGAAAGCTATATCGGCGCCAATCCCTGGCAGAC CGTGGCCATCACCACCGCGGTGGGCCTGCTCGCCGGCTTCCTGCTCGGGCGTCGCTCCTGAGCACGCGGTCGGTGCCGCACAACGGACTCGTTACCTTCG
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| Amino Acid Sequence |
>TonB-dependent receptor
MDRRNEPSPLPTKRPLAPLMLLMAACSSPALAEDAARKDDPLELGADTVTGEQASSRVERSASAKYAVLLLDTPQTVTVVPQKVIQEQNALSLRQVLSNV SGITFNAGEGGGGSGDSINIRGFSANANMQVDGLRDSAQTSRSDLFNLEAVEVIKGPNSVFGGAGTSGGSINMVSKQPKAEAFTHLGAGLGTDRYRRLTL DTNQPLEGLGESTAFRLNLMAHHNDVAGREQIDKQRWGIAPSLTFGLDTPTRLTLSYFHQRDDNLPDYGVPALNGRKLDGVSRHDYFGWRNLDEERIDND VATLKLEHDFSDDFQLQNLIRYSHLHRDTVISASHVNQKGLPPGRYLPAGPQAYGRDSKTRMWINQTNLTGRFDTFGLAHTLIGGFELSRETYDRTTYSY NLGKFYPANGFDLHNPPGYWNGPTDKRDSARNRTELEVKALYAFDTIALDERWDLSLGLRYDWIDGTSRSTPSGKPTVRADSSDSKLSTRAGLVFKPLEN GRVYFSYGTSFNPSAEHLVTTGSGVTEATGGLAPEKNSTYELGTKWEFLGRRLELDAALFQVKKEDARERLADGSYVLAGEQRVRGLELSASGKLNEHWD LFATYTYLDSETLKSSNPQREGQALGNTPPRSLSLWSTYELPEGVTLGYGARYVSQRNVTSVDNGKLDAYWVHNMMLGYQATRDLKLQLNLDNLFDKAYV ERVRQVYGNQSRSSAIEYGDGRTAILSAIYAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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