Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCATCCTCCTCGCGCCAGGCCTGCAGGGTGCGCTGGCTGAGCAATGCCAGGCGCAGCAGGTGCGCGGCATTGCGGCGGTTCAGCGAGCCGCGGCAGGC CGCGAGGAAGCCCAGCAGCCAGCGCCACTGCGCCGGATCAAGACGCGGCCGCAGGCGCAACGGCGCATCGTTGCGCAGCAGCCAGCCGAGCGCCTGGGCC GGCACGCCGCTGTCGGCCAATGGCGCCACGTAGCGATAGGACAACTGCCCGCCATTGGCGTAGCTGGTTTCCAGCCCGCCCCGCTCGCGCGCTTCCACCA GGGTCACGTCGAACCCTTCGCGAACCAGGGCGTAGGCCGTGGCCAGGCCGACCACGCCGGCGCCGATGATGCAAACCCGCTGAGCCATGACAATCGTTAT CCAGGTGTTTTCCAGGGCTTCGACGATAGGCGCGGATGACAGCGCTAGGACAATGAATAAAGATGGCCAGGGTATAAATCCAGGTTATGGGTTCGCGCCG
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DNA Sequence for Gene |
>NQ02_RS13025
ATGAAGCTCCGCCATATCGAAGTGTTCCAGGCGATCCGCCAGGCTGGCTCGGTCAGCGGCGCCGCACAGTTACTGCATGTGTCCCAGCCGGCGGTGAGCA AAGTCCTGCAACACGCCGAGCAGCAACTGGGCTTCCCGCTGTTCCTGCGGGTACGCGGCAAGCTGCTGGCGACCCCGGAAGCGCTGGAACTGGAGCGCGA AGTGGCCAAGCTCAGCGATAGCCTCCAGGCCGTGCGGCGCCTGGCGCAGAACCTGCGGCGCCAGCCGGGCCACAGCCTGCGCATCGGCGCCACCCCGGCC CTGGCGCTGTCGCTGCTGCCGCGGGCGATCGGCGAATGGAGCGCGCGCTATCCGCAGAGCGGCTGCGAACTGGCCACCCTGCATTCGCGCGAGCTGGTGC AGGGCCTGCTGATGCGCGAACTGGACCTGGCCCTGAGCCTGAAGCAGCCGGAACACCCCGGCCTGCGCGGCGAAGCCATCGCCAGCGGCGTGCTGGTGGC CCTGGCGCCGCGCGAACACTGGCCCGAAGCGGAACGCCGGCAGCCGCTGAGCCTGGCCGGGCTGGCCGGCGAAGCGCTGATCGGGCTGTCCACCGCCGAC CCGCTGTTCGCCCGCCTGGAGGATTACCTCAGCGCCGTGGAGCCACCGCCGCAGATGAAGATCGCCGTGCAGACCTACGCCCTCGCCCGCGCCCTGGTAG AGGCTGGGGCCGGCCTGGCGCTGGTCGATCCCTTCACCGCCCTCGGCGCCGACCCGCACAGCACCGCGATCCGCCCATTGAGCCCGGCCTTCCCGGTCAC CCTCTACGCCATCACCCGCGCCGACGAAACCCCGCCGCACACCCTCGCTCCGCTGCTGCGGATGCTCGCCCGCCAGGCCGAGGAGCGTTTGCGGGCCGTG CAGATGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATTTGCCGCCTGGCCTGCCGCTGGAAACCTTGGACGTCGTTCTGGCCTGGCCCACGCCTCGCGTCCTTACCGCTCCGGCTTCCAGTCTGGGCGGTCCGC GTCGTAGCCCTGGGTCGGGTGCGGTGGCAGAGGATGGTCCTTTATCAAGTCGGGAAAACGCAAATCAGGATCAGCGGCAAGTCGATCGTAAATACCATCA TATAGTTTGTGCAGTTTTTCATCGGGGACGTACCACATTGCACTTGCAGGAGGAGTCTTGTTTCCAAAGACGCGCGAGAGGAAGAAAGCCGCGCTCTTGC CACCCTGAGAGACTGACACCTGATAGTAACCTAATGCTTTTGGGAAATTATGCTCTACTATCTTGTAATACGCCCCCAGCTCATAACTAGCCGGCGCATA GCCCTGGCTAGCAGCACAGTTAGTATACGCCAACCCCAAATCCTTTTTTTTTGGCCACATATATATAAAGCTTACCTAGTTCGGTTAGCGCCGGCGGATT
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Amino Acid Sequence |
>putative transcriptional regulator
MKLRHIEVFQAIRQAGSVSGAAQLLHVSQPAVSKVLQHAEQQLGFPLFLRVRGKLLATPEALELEREVAKLSDSLQAVRRLAQNLRRQPGHSLRIGATPA LALSLLPRAIGEWSARYPQSGCELATLHSRELVQGLLMRELDLALSLKQPEHPGLRGEAIASGVLVALAPREHWPEAERRQPLSLAGLAGEALIGLSTAD PLFARLEDYLSAVEPPPQMKIAVQTYALARALVEAGAGLALVDPFTALGADPHSTAIRPLSPAFPVTLYAITRADETPPHTLAPLLRMLARQAEERLRAV QM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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