Pseudomonas aeruginosa AZPAE12140, NQ02_RS12720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCCGGGTCCGGCAGGACCCAGTCGTTGTCCGGGCCCCGACCGATGGTCAGCTGTCCCTGGTCCAGTACCTTTTCCGAACACTGACCGGGGGTCAGCTT GTGGTAGCTGGTGATGGTCAATCGCAGCGGCATTGCTACTCCTTGCATTGCCAGCGCCCGGCTCTTCCAGGCGCTCACCCCCGTGCCCGAGGGATTTCGG TTCGCATCCAGGCTGGCCCGACGGCTTTCCGGCGTTTCGTCGCCTCGGGAAGACACATCGGGTGGTACCGGATTATAAAAGACTAATCCTACGTCTTTTA AAGATTTGTCCGATCTGCGGTGTCATGCAACTAGTGGCGTTGTGCCTTCCTTGACAAGCCTTGCGGCATGCCACAAGAATTTTGCCAACCTTTCGAGTCA TCCGATATTCATCAATGGCTCCTACAAGATCCGACGGAGTGGATCTTACAAGCGAAGGTGAGGGCCGCGCAGCGGCTTCGATGATAGGGAGATCGTCACC
DNA Sequence for Gene
>NQ02_RS12720
GTGCTGGATGTACCCGTTTTGCTGGCTGCCGTATCCCCGGACTCGCCCTGTGGCGACGATCTGGAGTACGACGCCGCGTTCCTCGAACTCGAACGCATCG CCCAGGGCCAACCCGAGCGCCAGATGGGCGATGCCGTGCTGCCCGCCGAACCGCCGGAGTGGCCGCGCGTACGCGCGCTGGCCAGCGAACTGTTCGGCCG TAGCAAGGACCTGCGGGTAGCCAACCTGCTGCTGCAGAGCAACGTCGCCCTCGACGGCCTGGACGGGCTCGCCGACGGCCTGCTGCTGGTCCGCGAGCTG CTCGGCCAGTACTGGGACGGCGTCTATCCGCTGCTCGACGCCGATGACGACAACGACCCCACCTTCCGTATCAACGCCCTCACCGGCCTGGTCGCCGAAC CGCTGCTGCAACTGGTCTGGGCGATCCCGCTGGTGCGCTCGCGGGCGTTCGGCCCGGTCAACCTGCGCGCCGCGCTGAACGCCGCCGGGCTGCAACGCTT CGCCAGCGAGACCCTGAGTCCCGAGCAGATCGCCGGCGCCTTCGCCGATGCCGACGCCGATGCGCTGGCCGCCACCCGGCGCGCCCTGGAAGGCGCCCAG GAACATGCCCTGGCCATCGAGAGCGGCGTCGCCGAACGGGTCGGCTCGGCCCAGGGACTCGACCTCGGTCCCCTTCGTCAACTGCTGCGCCAGGCCCTCC AGGTGTTCGACCTGTACGGCCCGCAGGGCGCCGGCGAGCCCTTGGCGCCGGGTGCCGAAGCGGCCGCCGACGAGCAGGGGGGCGCCGCGCCTGTCGCAGC CGTCGCCGCGCCGGCACCGCGAGCCAGCGGCGAGATCGCCAACCGCGAAGACGTCCTGCGCCAGCTCGACCGCCTGCTCGAGTATTACGTTCGCCACGAG CCGTCGAGCCCGGTGCCGGTGCTGCTCAAGCGCGCCAAGACACTGGTGACGGCCGACTTCGCCGAAATCGTGAGGAATCTCATCCCCGATGGGATTTCCC AGTTCGAAACCCTGCGAGGCCCGGAAAGCGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCCTAGCGGCCGTCCGGGCCAACGCTGCAAGCCGCCGGGGCGATTCCGACGGCGCTAACAACCGCCGTCGCGCGAGGGAGAAACAAGATGGGAAGCACT ACCAGCAGTCAGAAGTTCATCGCCAGGAACCGGGCGCCACGCGTGCAGATCGAGTACGACGTGGAGTTGTACGGTGCCGAGAAGAAGGTCCAGCTGCCCT TCGTCATGGGCGTCATGGCTGACCTCGCCGGCAAGCCCGCCGAACCCCAGGCGGCGGTCGCCGACCGCAAGTTCCTGGAGATCGACGTGGACAACTTCGA TGCCCGGCTGAAGGCGATGAAGCCGCGGGTGGCCTTCAACGTACCGAACGTGCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACCTTCGAGAGCATG GACGACTTCAGCCCCGCCGCGGTGGCGCGCAAGGTCGATTCGCTGAACAAGCTGCTCGAGGCGCGTACCCAGCTGGCCAACCTGCTGACCTACATGGACG
Amino Acid Sequence
>type VI secretion protein ImpA
MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVREL LGQYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPEQIAGAFADADADALAATRRALEGAQ EHALAIESGVAERVGSAQGLDLGPLRQLLRQALQVFDLYGPQGAGEPLAPGAEAAADEQGGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHE PSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRGPESE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site