Strain | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGCTACACCATCCATAGCGCGGTGCACGAGGTCCGCCACGACGTCGAGTGCGTGCTGCACACCCATACCGCCGCGGGGATCGCGGTGTCCTGCCAGA AGCAGGGCCTGTTGCCGCTGTCGCAGCAATCGTTGTTCGTGCTCTCCAGCCTGTCCTACCACGCCTACGAGGGCGTCGCCCTGAACCATGAGGAAAAGGC CCGCCTGCAGGCCGACCTGGGGGCCAGCAATTTCCTGATCCTGCCCAACCACGGCCTGCTCACCTGCGGCGGTTCCATCGCCGATACCTTCCTCATGATG TTCACCCTGCAACGCGCCTGCGAGGTACAGGTGATGGCGCAGAGCGGCGGCGCCGAGCTGATCCAAATCCCGGGGCAGATCCTCGCCGGCGCGCGCGACA TGATCGCCGGGGTGATGCGCAGCAAGACCGGCATGGGCGGCCAGCTCGCCTGGCCGGCGCTGCTGCGCAAGCTCGACCAGCAGAACCCGGGCTACCGCCA
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DNA Sequence for Gene |
>NQ02_RS01990
GTGACCGCGGCGCTGCCCGGCATTCCACTGGAGGCCTGGCGGAGGCGGGGCCGCACCCTGGATTTCAAGGGCTTCCCGATCCGCTACTGGGAAGCCGGGC AGGGTCGGCCGTTGCTGCTGATCCACGGTTTTCCCAGCGCCGCCTGGGACTGGCACTACCTCTGGGAGCCGCTGGCGCAGCGCTACCGCGTGCTGGTCTG CGACCTGCTCGGCTTCGGCGATTCGGCCAAGCCGCGCGCCCATCGCTACAGCCTGCTGGAGCAGGCCGACCTGCAACAGGCGCTGCTCGGCCGCCTGGGA ATCGACGAGCCGCTGCACGTGCTGGCCCACGACTACGGCGACAGCGTCGCCCAGGAACTGCTCGCCCGCCATCACGAAGGCCGGCTGCGGCTCGCCTCCT GCGTGTTCCTCAATGGTGGGCTGTTCCCGGAAACGCACCGCCCGGTGCTCAGCCAGAAGCTGTTGCTGAGCCCGTTGGGCGGGCTGTTCGGCCGGCTGTT CGAGCGCCGCGCCCTGGCGCGCAACTTCGCCAAGGTCTTCGGCCCGCGCAGCCAGCCCGGCGAGACCGAGCTGGATGCCTTCTGGAGCCTGATCGAAAGC AACCAGGGGCAGCGGGTGATGCATCGCCTGATCCGCTACATCGTCGACCGCCGCGAGCAGCGTGAGCGCTGGGTGGCGGCGTTGCAGCACGGCGGGGTGC CGTTGCGGGTGATCGACGGAGCCGTCGACCCGATCTCCGGGGCGCACATGGTCGAGCGCTACCGGCAACTGGTCGCCGATGCCGACTGCGTGCTGCTCGA TGGCATCGGCCATTATCCGCAGATCGAAGCGCCGGCGGCGGTGCTCGAACATTACCTGGCGTTTCGCGCCCGACTGGATGATTCAGAGTTTTCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAGTTTGAGATTGCAGCAAGTGCCATCGCGCAAGGATCGGGGCTAGGGTGCTGGCGCCTCGCTGGACGAGGCGTTTCGTCACCCATGGAGGTCTCCAT GCACGATCCCGTTTCTCCCTTGCGCGTGTTCGACGAGGGCTCCTGGTTGTTCCGCCAGATGGTGCAGGCGCAACCGTTCATCCGCCAGTCCGGGATGGTC CTCGCCGAACTCGGCCTGCTGCTGGCGCTCGGGCTCGGCTACCTGTGCTGGCAGGAAGGCAGTCGCTGGTACGCCGTCGGCGCCGGCCTCGCGTTGCTCG GCAGCCTGCTGCTGGTGGTGGTCCGGCACAACTACGACTGGTGGCTGTTCAAGCTCGGCCCGCGTGGCCGGCTGTACATTCCGTTCGACTGAAGCGGAAC ATCCCGCTGCCTTATCGGGCGCCATTCATGGCGGCGCGAAGCCTTGTCCCCGCCGGCGGGCTGGCCGACACTCGGGCAATCCTTCCTACTGTCCTGGAGT
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Amino Acid Sequence |
>alpha/beta hydrolase
MTAALPGIPLEAWRRRGRTLDFKGFPIRYWEAGQGRPLLLIHGFPSAAWDWHYLWEPLAQRYRVLVCDLLGFGDSAKPRAHRYSLLEQADLQQALLGRLG IDEPLHVLAHDYGDSVAQELLARHHEGRLRLASCVFLNGGLFPETHRPVLSQKLLLSPLGGLFGRLFERRALARNFAKVFGPRSQPGETELDAFWSLIES NQGQRVMHRLIRYIVDRREQRERWVAALQHGGVPLRVIDGAVDPISGAHMVERYRQLVADADCVLLDGIGHYPQIEAPAAVLEHYLAFRARLDDSEFS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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