Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCGCGGCTGATCGCGCAGAAGTTCGACGGCGAGGAGTGGTTCCATTCGCGGCCTTCGGCGGGCGACTACGCCACCGTTTCCAGTGCCGCGAGCAACCTGG CGCCGAGCAACCCGGCACTGGCCGAGCGCATCGCCAGGGACGCCGCCCAGGAGCGTATCGCCGACCAGGGGCCGGTGCCGCTGGCGCTGGTCACTACCTC CGGTAGCGGACTCGATCCGCAGCTGCCGCCGCAGGCCGCGCGTTACCAGGCGCTGCGGGTGGCCACGGCGCGCGGGCTGCCGCTGCGGCTGGTGGAAGAC CTGGTGGAAAGCCACACCGAGCGGCCGCTGGTGGGGCCGGCGGTGGTCAACGTGCTGGCGCTGAACATGGCGCTGGCGGGGTTGAAGCGCTAGGTTTCCC CAGAGACCCACGCAAGGGCTTGCAATATCGCCGCATCGGCGGATGATCGCCGGCGATCGTCCGCCCTGCGCGGCGCAGAGCAACGGAGTACGACCGATCC
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DNA Sequence for Gene |
>PADK2_17530
ATGACCGACACCGCACGCGCCGACGCGCTGCTGGCCGACCTGCCCGCTGACGGGCGCGGCCGCCTGAAAGTCTTTCTCGGCGCGGCGCCGGGGGTGGGCA AGACCTTCGCCATGCTGCAGGCCGCCCAGGCCCAGTTGCGCCAGGGCGTGAAACTGCGCGCCGGGGTGGTCGAGACCCACTCGCGGGCGGAAACCGAGTC CCTCCTCGCAGGCGTGCCGCAGCAGCCGCTGCGCAGCCTCGAGTATCGAGGGATGAAACTGCAGGAAATGGACCTCGACGGTCTCCTCGCCGACCCGCCG GCGCTGGCCCTGGTCGACGAACTGGCCCACAGCAACGTTCCCGGCAGCCGCCACGCCAAGCGCTGGCAGGACATCCAGGAGTTGCTGGCGGCGGGAATCG ACGTCTACACAACGGTCAACGTCCAGCACCTGGAGAGCCTCAACGACCAGGTCCGCGACATCACCGGCGTGCAGGTCCGCGAGACGGTGCCGGACTGGGT GTTGCAGGAGGCCTACGAGATCGTCCTCATCGACCTGCCGCCGCGCGAGCTGCTGGAGCGCCTGCGCGAGGGCAAGGTCTACGTGCCGGAACAGGCGCGG GCGGCGATCGATGCGTTCTTCTCGCAGACCAACCTCACCGCGCTGCGTGAACTGGCGATGCAGACCGCCGCCGCGCGGGTCGACGCCGACCTCAACCACC GCTACCGCCAGCGCGGCGAGGAAGCGCCGGCGTTGCGCGGGCGGCTGCTGGTGGGCATCGACGGTGACGAACAGGCCGAACGCCTGGTGCGCCACGCCTG CCGGGTCGCCGAACGTCGGCACCTGCCCTGGAGCGTGGTACACGTCGATACCGGCGGCTTGCGCGGCGAGCAGGCGCGGATGCGCCTGCAGGGTGCGCAG CAACTGGCCGAGCGGCTCGGCGGCGAGATCGTCGTGCTGCGCGCCGGCGAGGTGGCGCGGACCCTCCTGCAACATGCCCGCGAGCGCCGCGCCAGCCTGG TCCTGGTTGGCCAGTCGCGGCGCCGCTGGTACCGCCGGGCCTTCGGCGGTGGTCTCGCCGGGCGTCTGCTGCGCGACGGCCAGGGCCTGGAGATCAGTGC CCTGGACAGCGAGGCCGACCTGCGCCCGGCGGAACCGCGGCCACGCTATCCGGTGGTGTGGAACGACTATCTGCTGGCGCTGCTGGCGACCGCCCTGGCC AGCGGCCTGGCCTGGATCGTGGCGCACCTGCTGGAGCTGCCGAACATCTCCCTGGTGTTCCTGATGGCGGTGCTGCTGGTGGCAGTGCGCAGCAGCCTGA TGCCGGCACTGCTGTGCGCGGTGGCGTCGTTCCTGGCCTATGACTTCCTGTTCATCCCGCCGCATTTTTCCTTCGCCATCCATCGCCACGAAGACCTGCT GAGCCTGGCGTTCTTCCTGTTCATGGCCGGCCTCACCGGCAACCTGGCGGCACGCCAGCGGCGCCAGCTGGAGGCGCTGCGCGATACCCAGGAGGAAACC AGCCTGCTGCTGGAGCTGTCGCGCAAGCTCACCGCCGCCACCGACCGCCAGGCGGTGCTGGCCGCCGCCGCCCAGCAGTTCGACGACTGGAAGGACGTCG AGGTCTGCCTGCTCGGTCAGGTCAATGGCGAGTGGAAGACCGAGGCCGGCGTGCAGCGGCAACTCGCCGACCAGGAACGGGTCGCCGCGGACTGGGCCTG GGCCCACGACCAGCCGGCCGGCCTCGGTACTGGCACGCTGCCCGGAGGACGCTGGTGGTGGTGGCCGCTGTCGGCGGAAGAGGGACCGCTGGCACTGCTC GGTGTCGCGCCGCTTGACGGCCAGCCGCTGAGCCCGCAGCGCCGGCGCCTGCTCGCCGCCCTCGGCCAGCCCCTGGCCCAGGCCCTGGCGCGGGCTCGCC TGGCCGAGGACCTGGAGGCCGCGCGCCTGCACGGCGAAACCGAGCAACTGCGCAGCGCCTTGCTCGCCTCGGTCTCCCACGACCTGCGCACGCCGCTGAC GGCCATGCGCGGCTCCATCGACAGCCTGCTGGCGCTGGGCGAGGCGATCCCGCCGGCGGATCGTCGCGAACTGCTGGAAAGCACCCGCGACGAGGCCGAG CGACTGGACCGCTATATCCAGAACCTGCTCGACATGACCCGTCTCGGCCACGGTGGCCTGAAGCTGGCGCGCGACTGGGTGGCGCCGGGCGACATCGTCG GCAGCGCGCTGAACCGCCTGCGCGCGGTGCTGGCGCCGTACCGGGTGCAGGCGATCGTGGCCAACGACCTGCCGTTGCTCTACGTGCATGCGGCGCTGAT CGAGCAGGCGCTGATCAACGTGCTGGAAAATGCCGCGCGCTTCTCGCCGAACCACGGCCGGTTGCGCATCGAGGTCAGCCAGGATGCCGCCGAGCTGCGT TTCGCGGTGAGCGACGAGGGGCCGGGGATTCCCGAGGCCGAGCGGGAGAAGATCTTCGACATGTTCTACACCGCTGCCCGTGGCGACCGCGGTGGCCAGG GCACCGGCCTGGGCCTGGCGATCTGCCAGGGCATGATCGGCGCCCACGGCGGGCGCATCAGCGTCGGCGAAGGCCTCGACGGTCGCGGCACCACGCTGGT CCTGCACCTGCCGCTGCATCCGCAGCCGGACCTCGGGCAACTGGAGGGCGACGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGGCGCACTTGCCTGGCGCCCGCGCTCGCGCTATTCCTGCCGTTTCCGCGACGCCGCCGCTGGCCTGTCGCCGTGTTCACCTGCCGTGCCGAGTGCC ATGACCCAATTGCAGAACAGCATCCTGCTGATCGACGACGAACCGCAGATCCGCAAGTTCCTCCGTATCAGCCTCAATGCCCAGGGCTACCGGGTGCTCG AGGCCGGCACCGGCGAAGAGGGGCTGGCCCAGGCCGCGCTGAACCGGCCGGACCTGGTGGTGCTCGACCTCGGCCTGCCGGACCGCGACGGCCAGGACAT CCTTCGCGACCTGCGCGAATGGTCGCAGGTGCCGGTGCTGGTGCTGTCGGTGCGCGCCAGCGAGGGCGAGAAGGTACTGGCCCTGGATGGCGGCGCCAAC GACTACGTGACCAAGCCGTTCGGCATCCAGGAGTTCCTCGCCCGCGTGCGCGTCCTGCTGCGCCAGGCGGCGCAGGGCGAAAGCCCGGAGGCGTCGGTGG
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Amino Acid Sequence |
>two-component sensor KdpD
MTDTARADALLADLPADGRGRLKVFLGAAPGVGKTFAMLQAAQAQLRQGVKLRAGVVETHSRAETESLLAGVPQQPLRSLEYRGMKLQEMDLDGLLADPP ALALVDELAHSNVPGSRHAKRWQDIQELLAAGIDVYTTVNVQHLESLNDQVRDITGVQVRETVPDWVLQEAYEIVLIDLPPRELLERLREGKVYVPEQAR AAIDAFFSQTNLTALRELAMQTAAARVDADLNHRYRQRGEEAPALRGRLLVGIDGDEQAERLVRHACRVAERRHLPWSVVHVDTGGLRGEQARMRLQGAQ QLAERLGGEIVVLRAGEVARTLLQHARERRASLVLVGQSRRRWYRRAFGGGLAGRLLRDGQGLEISALDSEADLRPAEPRPRYPVVWNDYLLALLATALA SGLAWIVAHLLELPNISLVFLMAVLLVAVRSSLMPALLCAVASFLAYDFLFIPPHFSFAIHRHEDLLSLAFFLFMAGLTGNLAARQRRQLEALRDTQEET SLLLELSRKLTAATDRQAVLAAAAQQFDDWKDVEVCLLGQVNGEWKTEAGVQRQLADQERVAADWAWAHDQPAGLGTGTLPGGRWWWWPLSAEEGPLALL GVAPLDGQPLSPQRRRLLAALGQPLAQALARARLAEDLEAARLHGETEQLRSALLASVSHDLRTPLTAMRGSIDSLLALGEAIPPADRRELLESTRDEAE RLDRYIQNLLDMTRLGHGGLKLARDWVAPGDIVGSALNRLRAVLAPYRVQAIVANDLPLLYVHAALIEQALINVLENAARFSPNHGRLRIEVSQDAAELR FAVSDEGPGIPEAEREKIFDMFYTAARGDRGGQGTGLGLAICQGMIGAHGGRISVGEGLDGRGTTLVLHLPLHPQPDLGQLEGDE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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