Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGATGAAGGTCGAGGTGGTGACCCCGGAGGACTACATGGGCGATGTGATGGGCGACCTCAACCGCCGGCGTGGCCTGATCCAGGGCATGGAGGATACTCC GGCGGGCAAGGTGATCCGTGCCGAGGTCCCGCTGGGCGAAATGTTCGGCTATGCCACCGACGTGCGCTCGATGTCCCAGGGGCGCGCGAGCTACTCGATG GAGTTCGTCCGCTATGCCGAGGTACCGGCCAGCGTGGCCGAGGCGATCGTCGCCAGGCAGGGCCGCTGAGAGCCGCCGCGCGCCGCCGAGGCCAGCGGCG GCGCGCGCCTTTCCGGGAGCGGCAGCCGCATCTTCGGCGCCGATGCGCTTGCCAAGCGGGGTTTTTGACGCCCCCTGGATGCTTAACTATAAGACAGTGA CCAAGGCCCGCACCTATACGGTCACAAGGATGGCGAATCGATGCTTGCTTCAGCGATTGCCAGCGGTACCGCAGTCTCCCAGGTCTCCAAGCATCTCCTA
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DNA Sequence for Gene |
>PADK2_15285
ATGTTCCTGGCCGCCCTTTTCCTCGCCCTCGGTGCATGCGGCTGGGCGATCCTGCACATCGCCAGGCACCAGGACGACATCGCCATCGAGCAGAGCCATT TCTACGTGGAAAAGGCGCTGCAGAATCGCCGGGAAAATTCCGAGCAGTTCTCCACCACCTATTCCTTCTGGACCGATGCTTACGTCTATCTGGGAAACCG GGTCGACGTGGACTGGGCCTTCACCAAGAACAACCTCGGCTCGGTGCTCTACACCACCAACGGCTACGACGGCGTCTTCGTCATCGACGACCGTGGCACT CGCTACGCCATGCTCGAGGGCGAGCTTTCCGAACGCTCGCTGGCCGACTCGCTGAACGCCGACACCGGGGACATCCTCCGCTCCGCACGCCGTGCCGCGG TGGACGAAGCGGCGATCAGCCGCTACGTCGACTTCGACGGCGCACCGGCGATCCTGGTCGCCTCGGCGATCAAGCCCACCAGCGATCATGCGCCCATCGA CCTGGCCAAGGCCTCGGTGATGGTCTTCGTCGACCGGCTGACCCCGGCGAAGCTGGCCAAGCTCGGCGGCGACTACGGCATCGCCAACCTGCACCTGCTG GCCTGCGGCGCGGCGGGCGACAAGGAAAGCCTTGCCCTGGAGGGCACTCCCCATCGCCTGGCCTGGGTGTCGTCGCGTCCGGGTAGCGCCATGCTGCGGG AGACCGCGTTGCCGCTGCTGGGAATCTTCGTGCTCGCCGCCGGGCTGCTGTTCTGGCTGAGCCGCAGCGCCGTGCTCAACGCCCGCGCGGTGGATCGCCA GCAGAAGGTCCTGAAACGCAGCAACCAGGCCCTGCTGGCCAGCGAGGAACGTTTCAAGTCGATAGCCGAGGCGGCCTCGGACTGGATCTGGGAAGTCGAC GGGCATTTCGTCTTCACCTATCTCTCCGTGCGCTTCCGCGACGTCACCGGCTACCAGCCGGAGGCCTGGATCGGGCGGCGGCTGGACGAGTTGCTGGATA GCGATACGGTGAACATCGTCAAGTGGCTGGAAGGGCTGCCCGATGCCGGTGCGCCGTCCAGCCTGGTCTGCGCTTTCCGCGACAGCCAGGGCCAGGCGCG GGTCGGCAAGCTGAGCGCCAGCGCGATCCGCAACGGCGTCGCCAGCGGCTATCGCGGCACGGCGGCCGACATCACCGACGAGGTCGAAGCCCATGCGAAG ATCCAGCATCTGTCCCTGCACGATGCCCTGACCGGCCTGCCGAACCGCAACAAGCTGTTCCAGTTCCTCGAACGCCTGCTGGCGGAAAAGGCTGGCAAGT CGCCGGTAGCGGTACTGATGCTCGACCTCGACCGCTTCAAGCCGATCAACGACCAGCACGGCCATCCCGCCGGCGATGCGGTGCTCTACGCCATCGCCGA ACGGCTGCGCGCCTCGACCCGCGACCAGGACATGGTTGCCCGGCTCGGCGGCGACGAGTTCGTGGTGGTCAGTACCCACGTGTCGTCGAAGCTGGAAATC GAGAAGTTCTGTAGCCGGCTGATCGACGTGATCAACCGCGAGGTCGCCTACGAAGGGCACAGCTTCCATGTCGGCGCCAGCATCGGCGTGGCCCTGGCGC CGGAGCACGGCGGCGATCCGCGCGGCCTGCTGCGTTGCGCCGACGTGGCGATGTACGAGGCCAAGGCCGCGGGGCGCAATACCTGGCGTTTCTACTTGGA AGCGATGGACTCCCATCTCGCCGAGAAGAAGCTGCGCGAGACCGAGTTGCGCGCCGCCTTGCAGAACGGCGAGTTCGAGTTGTACTACCAGCCGCGTTTC CTGGCGCAGGAACAGACGATCGCCTCGGCGGAGGCGTTGATCCGCTGGAACCATCCGCGCCGCGGGCTGATCGGCCCGGACGAGTTCATCGGCCTGGCGG AAGAAAGCGACCTGATCGTACAGATCGGCAACTGGGTGCTGCGCGAGGCCTGCGCCACCGCCGCCAGCTGGCCAGGCGAGGTGATGGTCTCGGTGAACGT GTCGCCGGCGCAGTTCATGACCGGCGATATCGTCTGGCAGGTGCGCGAGGCCCTGCGCCTGGCCCGCCTGGATGCTCGCCGGCTGGAGCTGGAGGTGACC GAGAACGTCATGCTCAACGATGTCGATGGCGCGCTGCGGACCATGACGGCCCTCAAGGAGCTGGGCGTCCGCCTCAACATGGACGACTTCGGTACCGGCT ATTCCTCGCTCGGCTACCTGCGCACCTATCCCTTCGACAGCATCAAGATCGACAAGCGCTTCGTCGCCAGCATGGAGAAGACCGGGCGCGACCGTTCGAT CGTGCAGGCCATCATCAATCTCGGCAACGCCCTGAACCTGCGGGTCACCGCCGAGGGCGTGGAGACCGAAGGGCAGATGCATATCCTGCGCGACGAGCAA TGCCACGAACTGCAAGGGTTCCTGCTCAGCCGGCCGCTGGATGCGCAGCGCCTGCGCGATCTGCTGGAGCGCGAGGCGGGGCAGACCCAGGCGCCACAGG TTTCCGCCGAAGGCCATGCTGCGCGCCGGCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAGGGAGTCAGAAGGGCGCACGCGGTGCCTCGGCGGCCCTCGGTTCAGCGATCGCCCTGCGTATGGTTCAGAAAATGCTGAACTGATTATTTGACCTGAC TGATTCCCTTCCCGTCTTCGCTTGCCGACACTCCGTCCTTCCCATGGCCTTGTGCCAGGGCCAGCGCCGGTGGTCGCTACCCGCTTCGGGCGAATCGCGG TGATGGTCTGCTACGACCTGGAGTTTCCCGAATGGGTGCGCCTGCCGGCGCTGTCCGGCGCACAACTGCTCTGCGCACCGGTGAACTGGCCGGCGGCACC GCGTCCCGAGGGCGAGCGGCCAGGCGCGGCTGGGCGAATGAAAAAGGGCGCGGGCCAGTATCGGCGCCGCGCCTTTTTGCCGGAGGAGAACCTTATTCCA GTTCGGTTGCGCTCTCTTCCTGGCGCTTCAACCCGGTATGACTGATGGCGTGCAGAGCGGTATTGAACTGTACGGTCTCGTTGAAACCCTTGACGATCTG
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Amino Acid Sequence |
>sensory box protein
MFLAALFLALGACGWAILHIARHQDDIAIEQSHFYVEKALQNRRENSEQFSTTYSFWTDAYVYLGNRVDVDWAFTKNNLGSVLYTTNGYDGVFVIDDRGT RYAMLEGELSERSLADSLNADTGDILRSARRAAVDEAAISRYVDFDGAPAILVASAIKPTSDHAPIDLAKASVMVFVDRLTPAKLAKLGGDYGIANLHLL ACGAAGDKESLALEGTPHRLAWVSSRPGSAMLRETALPLLGIFVLAAGLLFWLSRSAVLNARAVDRQQKVLKRSNQALLASEERFKSIAEAASDWIWEVD GHFVFTYLSVRFRDVTGYQPEAWIGRRLDELLDSDTVNIVKWLEGLPDAGAPSSLVCAFRDSQGQARVGKLSASAIRNGVASGYRGTAADITDEVEAHAK IQHLSLHDALTGLPNRNKLFQFLERLLAEKAGKSPVAVLMLDLDRFKPINDQHGHPAGDAVLYAIAERLRASTRDQDMVARLGGDEFVVVSTHVSSKLEI EKFCSRLIDVINREVAYEGHSFHVGASIGVALAPEHGGDPRGLLRCADVAMYEAKAAGRNTWRFYLEAMDSHLAEKKLRETELRAALQNGEFELYYQPRF LAQEQTIASAEALIRWNHPRRGLIGPDEFIGLAEESDLIVQIGNWVLREACATAASWPGEVMVSVNVSPAQFMTGDIVWQVREALRLARLDARRLELEVT ENVMLNDVDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFVASMEKTGRDRSIVQAIINLGNALNLRVTAEGVETEGQMHILRDEQ CHELQGFLLSRPLDAQRLRDLLEREAGQTQAPQVSAEGHAARRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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