Pseudomonas aeruginosa DK2, PADK2_14100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pdk02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | IPR029044 | Nucleotide-diphospho-sugar transferases | 2 | 231 | 6.4E-29 |
| PANTHER | PTHR43685 | GLYCOSYLTRANSFERASE | - | - | 5 | 275 | 1.1E-24 |
| FunFam | G3DSA:3.90.550.10:FF:000151 | O antigen biosynthesis rhamnosyltransferase | - | - | 1 | 220 | 1.5E-101 |
| Pfam | PF13641 | Glycosyltransferase like family 2 | - | - | 2 | 221 | 3.9E-12 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | IPR029044 | Nucleotide-diphospho-sugar transferases | 5 | 219 | 9.0E-36 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.