Pseudomonas aeruginosa DK2, PADK2_11730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DK2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCAGGAAGCAATCCTGGATCGTCGGCCGCCTTGGTCAGTGGGAATCGCCCTGGAGCGTCTGGCTGAGGAATACCCTCGTTCGCCTGGTGCCGAATGCCA GTCGCAGGCGCCTCCACCAGCGTCTTTTCACCGGTGTCGGTGAGATGGCCGCGCAGTAGCCGCCGGTGCCAGTGGCGTCTTGGTCGCCTGTTTTCGACTT CGGCGATGGTCGCTATGGAGGAGTCCCGGGCAACCAGGGCGCTTGCGCTTTACCAGGCCCGGCGTCGCTGGGCTCTCCACAGATTCGCCGGTTTTTGCTG CGATCCGGTCTGCCGCTCGCCGGGGGCTGGCGGTATACTTCGCAGCGCCCGTTCGATGCCGTCGAATGATGTTTCCATGACGCTTGATTTATGACGCCTT TGCGCCAAGCTAGGTCATGGGATGGCTTTCTGTTAAGGTTGCCGAAATCTCCTGGGGGCCCGTGTGGGCGGTTGTCTGCTAATGCGCGACGAGGTGCAGC
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| DNA Sequence for Gene |
>PADK2_11730
GTGATTAAGGTGCTGGTGGTCGACGACCACGATCTGGTACGCACCGGTATTACCCGCATGCTGGCCGACATCGAAGGCTTGCAAGTGGTCGGCCAGGCCG ACTGCGGTGAAGACTGTCTGAAACTGGCCCGCGAACTGAAGCCGGATGTCGTCCTGATGGACGTGAAGATGCCCGGTATCGGCGGCCTGGAGGCAACCCG CAAGCTGCTGCGCAGCCAGCCCGACATCAAGGTCGTGGTAGTCACCGTCTGCGAAGAGGATCCGTTCCCCACCCGCCTCATGCAGGCCGGCGCCGCCGGC TACATGACCAAGGGCGCGGGGCTGGAGGAAATGGTCCAGGCGATTCGCCAGGTCTTCGCCGGCCAGCGCTATATCAGCCCGCAGATCGCCCAGCAACTGG CGCTGAAGTCCTTCCAGCCGCAGCAGCACGATTCCCCCTTCGATTCGCTGTCCGAGCGCGAGATCCAGATCGCCCTGATGATCGCCAACTGCCACAAGGT GCAGAGCATCTCCGACAAGCTGTGCCTGTCGCCGAAGACCGTGAATACCTATCGCTACCGCATCTTCGAGAAGCTCTCGATCACCAGCGACGTGGAGCTG GCGCTGCTCGCCGTCCGCCACGGCATGGTCGATGCCGCCAGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATGAGCGCCGTTTTCGACGCAAGCGCTTTCCTCGCTACCTGCAGCAATCGTCCGGGCGTCTACCGCATGTTCGATGCGGACGCCAAGCTTCTCTACGTGG GCAAGGCGAAGAGCCTGAAGAAGCGCCTGGCCAGCTATTTCCGCAAGTCCGGCCTGGCGCCGAAGACCGCTGCGCTGGTGGCGCGGATCGCCCAGGTGGA AACCACCATCACCGCCAATGAAACCGAGGCGTTGCTGCTGGAGCAGACGCTGATCAAGGAGTGGCGGCCGCCCTACAACATCCTGCTGCGGGACGACAAG TCCTATCCCTTCGTGTTCCTCTCCAGCGAGGACGAGTATCCGCGGCTGTCCCTGCACCGTGGCGCGAAGAAGCGCAAGGGGCGTTACTTCGGTCCCTATC CGAGCGCGGGAGCGATCCGCGAGAGCCTCAACCTGCTGCAGAAGGCGTTTCTCGTCCGCCAGTGCGAGGACAGCTATTTCCGCAACCGTACGCGGCCCTG
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| Amino Acid Sequence |
>response regulator GacA
MIKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIGGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAG YMTKGAGLEEMVQAIRQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVEL ALLAVRHGMVDAAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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